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S3-16-all-fractions_k255_4976462

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_4976462_1
unknown

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comp(1..96)
DNA (96bp) protein (32aa)

This feature has no annotations

S3-16-all-fractions_k255_4976462_2
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(93..485)
DNA (393bp) protein (131aa)
Fumarate reductase subunit C n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EKS5_AMYSD
Fumarate reductase subunit C
Fumarate reductase subunit C {ECO:0000256|SAAS:SAAS00095967}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
S3-16-all-fractions_k255_4976462_3

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comp(482..1231)
DNA (750bp) protein (250aa)
fumarate reductase n=1 Tax=Kribbella catacumbae RepID=UPI000361A632
Succinate dehydrogenase iron-sulfur protein {ECO:0000313|EMBL:AKA59474.1}; TaxID=1630016 species="Bacteria; environmental samples.;" source="uncultured bacterium AZ_40.;"
frdBC; putative fumarate reductase
S3-16-all-fractions_k255_4976462_4

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comp(1238..2992)
DNA (1755bp) protein (585aa)
frdA; Putative fumarate reductase [flavoprotein subunit] FrdA (fumarate dehydrogenase) (fumaric hydrogenase) (EC:1.3.99.1)
fumarate reductase flavoprotein subunit n=1 Tax=Kribbella catacumbae RepID=UPI00035C6254
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:AKA59475.1}; TaxID=1630016 species="Bacteria; environmental samples.;" source="uncultured bacterium AZ_40.;"
S3-16-all-fractions_k255_4976462_5
unknown

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comp(2985..3212)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037877CB
S3-16-all-fractions_k255_4976462_6
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3345..6191)
DNA (2847bp) protein (949aa)
Transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A6G3_THECD
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACY96438.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
S3-16-all-fractions_k255_4976462_7
Janibacter hoylei, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6317..7084)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Demetria terragena RepID=UPI0003811D60
Uncharacterized protein {ECO:0000313|EMBL:EKA61253.1}; TaxID=1210046 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter hoylei PVAS-1.;"
hypothetical protein
S3-16-all-fractions_k255_4976462_8
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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7121..8221
DNA (1101bp) protein (367aa)
L-fuco-beta-pyranose dehydrogenase {ECO:0000313|EMBL:AJR18174.1}; EC=1.1.1.122 {ECO:0000313|EMBL:AJR18174.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI0003653BE1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
S3-16-all-fractions_k255_4976462_9
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8237..11140)
DNA (2904bp) protein (968aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00035ECA91
Putative Transcriptional regulator, LuxR family {ECO:0000313|EMBL:CCH76628.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
ATPase-like protein
S3-16-all-fractions_k255_4976462_10
unknown

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11328..11609
DNA (282bp) protein (94aa)

This feature has no annotations

S3-16-all-fractions_k255_4976462_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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11673..12314
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7Y0H9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON25122.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_4976462_12
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12308..14422)
DNA (2115bp) protein (705aa)
Alpha-galactosidase {ECO:0000313|EMBL:KFI60163.1}; EC=3.2.1.22 {ECO:0000313|EMBL:KFI60163.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
glycoside hydrolase clan GH-D (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A2Z8_BIFAD
S3-16-all-fractions_k255_4976462_13
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(14492..15415)
DNA (924bp) protein (308aa)
ABC transporter, permease protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7F2S6_9ACTO
ABC transporter, permease protein {ECO:0000313|EMBL:ELP65301.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
ABC-type sugar transporter permease
S3-16-all-fractions_k255_4976462_14
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(15412..16404)
DNA (993bp) protein (331aa)
ABC transporter, permease protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7F0V2_9ACTO
ABC transporter, permease protein {ECO:0000313|EMBL:ELP65303.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
binding-protein-dependent transporters inner membrane component
S3-16-all-fractions_k255_4976462_15
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(16486..17796)
DNA (1311bp) protein (437aa)
ABC transporter, substrate-binding protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7F3U4_9ACTO
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ELP65295.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
extracellular solute-binding protein
S3-16-all-fractions_k255_4976462_16
Pseudomonas viridiflava, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17991..18164
DNA (174bp) protein (58aa)
DNA-binding transcriptional regulator FruR n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6BJC4_PSEVI
LacI family transcriptional regulator
Strain LMCA8 contig_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34013.1}; TaxID=33069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas viridiflava.;"
Displaying 16 items

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