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S3-16-all-fractions_k255_5842404

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_5842404_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..224
DNA (222bp) protein (74aa)
Aminodeoxychorismate lyase n=1 Tax=Nocardioides sp. CF8 RepID=R7XXS2_9ACTO
Aminodeoxychorismate lyase {ECO:0000313|EMBL:EON24144.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
aminodeoxychorismate lyase
S3-16-all-fractions_k255_5842404_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

262..1068
DNA (807bp) protein (269aa)
Shikimate dehydrogenase n=1 Tax=Nocardioides sp. CF8 RepID=R7XYS3_9ACTO
Shikimate dehydrogenase {ECO:0000313|EMBL:EON24145.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
shikimate dehydrogenase
S3-16-all-fractions_k255_5842404_3
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1077..1841
DNA (765bp) protein (255aa)
Peptidase A24A, prepilin type IV n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJD1_NOCSJ
peptidase A24A, prepilin type IV
Peptidase A24A, prepilin type IV {ECO:0000313|EMBL:ABL81916.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_5842404_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1854..3032
DNA (1179bp) protein (393aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000255|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000255|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000255|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000255|HAMAP-Rule:MF_00300}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Chorismate synthase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=AROC_NOCSJ
S3-16-all-fractions_k255_5842404_5
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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3032..3586
DNA (555bp) protein (185aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Nocardioides sp. CF8 RepID=R7XXW4_9ACTO
S3-16-all-fractions_k255_5842404_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3576..4676
DNA (1101bp) protein (367aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
3-dehydroquinate synthase n=1 Tax=Nocardioides sp. CF8 RepID=R7XXS8_9ACTO
3-dehydroquinate synthase
S3-16-all-fractions_k255_5842404_7
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4673..5104
DNA (432bp) protein (144aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Nocardioides sp. CF8 RepID=R7XYS8_9ACTO
S3-16-all-fractions_k255_5842404_8
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5183..5761
DNA (579bp) protein (193aa)
PE-PGRS family protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UR58_9ACTO
PE-PGRS family protein {ECO:0000313|EMBL:EGD44397.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
S3-16-all-fractions_k255_5842404_9
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5796..7367)
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000382A717
ATP-dependent DNA ligase {ECO:0000313|EMBL:KGM00442.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
DNA ligase D
S3-16-all-fractions_k255_5842404_10
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7474..8235
DNA (762bp) protein (254aa)
Phosphoglycerate mutase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SA43_INTC7
Phosphoglycerate mutase {ECO:0000313|EMBL:EWT03959.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
phosphoglycerate mutase
S3-16-all-fractions_k255_5842404_11
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8213..9106
DNA (894bp) protein (298aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=910954 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Dietzia cinnamea P4 RepID=E6J6I1_9ACTO
hypothetical protein
S3-16-all-fractions_k255_5842404_12
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9566..10219)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WL32_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB94516.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
NAD-dependent epimerase/dehydratase
S3-16-all-fractions_k255_5842404_13
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10364..10927
DNA (564bp) protein (188aa)
Elongation factor P n=1 Tax=Nocardioides sp. CF8 RepID=R7XXW5_9ACTO
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
elongation factor P
S3-16-all-fractions_k255_5842404_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10937..11347
DNA (411bp) protein (137aa)
N utilization substance protein B homolog n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=NUSB_NOCSJ
transcription antitermination factor NusB
N utilization substance protein B homolog {ECO:0000255|HAMAP-Rule:MF_00073}; Short=Protein NusB {ECO:0000255|HAMAP-Rule:MF_00073};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
S3-16-all-fractions_k255_5842404_15
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11425..12234
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XWV0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON23773.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_5842404_16
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12262..12957)
DNA (696bp) protein (232aa)
Regulatory protein, TetR n=1 Tax=Nocardioides sp. CF8 RepID=R7XWW4_9ACTO
Regulatory protein, TetR {ECO:0000313|EMBL:EON23771.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
regulatory protein TetR
S3-16-all-fractions_k255_5842404_17
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13011..13349
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H717_STRPR
Uncharacterized protein {ECO:0000313|EMBL:EST18962.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
Displaying 17 items

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