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S3-16-all-fractions_k255_6342347

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_6342347_1
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..721)
DNA (720bp) protein (240aa)
ABC transporter, ATP-binding protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V2X0_9ACTO
ABC transporter
Zinc ABC transporter, ATP-binding protein ZnuC {ECO:0000313|EMBL:AIY18332.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
S3-16-all-fractions_k255_6342347_2
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(718..1668)
DNA (951bp) protein (317aa)
Periplasmic solute binding protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYN6_9ACTO
Periplasmic solute binding protein {ECO:0000313|EMBL:EON24398.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
periplasmic solute binding protein
S3-16-all-fractions_k255_6342347_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1790..2119
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYI2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24399.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_6342347_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


2174..3574
DNA (1401bp) protein (467aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
Glycine--tRNA ligase n=1 Tax=Nocardioides sp. CF8 RepID=R7XZH2_9ACTO
glycine-tRNA synthetase subunit beta
S3-16-all-fractions_k255_6342347_5
unknown

Not on your lists

3636..4079
DNA (444bp) protein (148aa)

This feature has no annotations

S3-16-all-fractions_k255_6342347_6
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4291..4911
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYL5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24401.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_6342347_7
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4949..6088
DNA (1140bp) protein (380aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
tRNA-dihydrouridine synthase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SI17_NOCSJ
nifR3 family TIM-barrel protein
S3-16-all-fractions_k255_6342347_8
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6367..7188
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYN8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24403.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_6342347_9
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7434..8705
DNA (1272bp) protein (424aa)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYJ3_9ACTO
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
putative deoxyguanosinetriphosphate triphosphohydrolase
S3-16-all-fractions_k255_6342347_10
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8706..9029)
DNA (324bp) protein (108aa)
Protoporphyrinogen oxidase n=1 Tax=Nocardioides sp. CF8 RepID=R7XZH8_9ACTO
Protoporphyrinogen oxidase {ECO:0000313|EMBL:EON24410.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_6342347_11
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9085..9348)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYM4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24411.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_6342347_12
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9341..9748)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYG3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24412.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_6342347_13
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9852..11777
DNA (1926bp) protein (642aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
DNA primase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V2Z5_9ACTO
DNA primase
S3-16-all-fractions_k255_6342347_14
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11774..12280
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYJ9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON24414.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
hypothetical protein
S3-16-all-fractions_k255_6342347_15
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12475..13752)
DNA (1278bp) protein (426aa)
FAD-dependent oxidoreductase n=1 Tax=Streptomyces chartreusis RepID=UPI000262E1D2
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KFF97810.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
putative oxidoreductase
S3-16-all-fractions_k255_6342347_16
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13894..14574
DNA (681bp) protein (227aa)
hydrolase n=1 Tax=Streptomyces chartreusis RepID=UPI000262EDDB
Hydrolase {ECO:0000313|EMBL:ELT45599.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
hydrolase
S3-16-all-fractions_k255_6342347_17
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14585..15259
DNA (675bp) protein (225aa)
GntR family transcriptional regulator n=1 Tax=Streptomyces chartreusis RepID=UPI000262EDDC
Putative HTH-type transcriptional regulator YdhC {ECO:0000313|EMBL:EPJ39627.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
GntR family transcriptional regulator
S3-16-all-fractions_k255_6342347_18
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15256..15765
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MV60_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KDN76041.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
S3-16-all-fractions_k255_6342347_19
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15776..16882
DNA (1107bp) protein (369aa)
amino acid racemase n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003669DEA
putative amino acid racemase
Putative amino acid racemase {ECO:0000313|EMBL:AEF40695.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
S3-16-all-fractions_k255_6342347_20
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16933..17667
DNA (735bp) protein (245aa)
dehydrogenase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035C46F8
putative dehydrogenase/reductase
Putative dehydrogenase/reductase {ECO:0000313|EMBL:AEF40696.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
S3-16-all-fractions_k255_6342347_21
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17776..18450
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MR00_9ACTO
Haloalkanoic acid dehalogenase {ECO:0000313|EMBL:KFF97899.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
hadL; putative haloalkanoic acid dehalogenase
S3-16-all-fractions_k255_6342347_22
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18548..19489
DNA (942bp) protein (314aa)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EKX7_AMYSD
Putative ABC-type amino acid transport/signal transduction systems, periplasmic component/domain {ECO:0000313|EMBL:CCH80230.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hisJ5; PAAT family amino acid ABC transporter substrate-binding protein
S3-16-all-fractions_k255_6342347_23
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19494..20438
DNA (945bp) protein (315aa)
ABC polar amino acid family protein transporter, inner membrane subunit n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EKX8_AMYSD
polar amino acid family protein ABC transporter inner membrane subunit
ABC polar amino acid family protein transporter, inner membrane subunit {ECO:0000313|EMBL:AEF41458.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
S3-16-all-fractions_k255_6342347_24
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20435..21202
DNA (768bp) protein (256aa)
ABC transporter-like protein n=1 Tax=Arthrobacter sp. SJCon RepID=L8TV35_9MICC
ABC transporter-like protein {ECO:0000313|EMBL:ELT45606.1}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
glnQ2; glutamine transport ATP-binding protein GlnQ
S3-16-all-fractions_k255_6342347_25
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21312..22010
DNA (699bp) protein (233aa)
Transcriptional regulator protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EKY7_AMYSD
transcriptional regulator protein
Transcriptional regulator protein {ECO:0000313|EMBL:AEF41467.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
S3-16-all-fractions_k255_6342347_26
Mycobacterium sp. KMS, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22308..23294)
DNA (987bp) protein (329aa)
tartrate dehydrogenase (EC:1.1.1.93)
Tartrate dehydrogenase {ECO:0000313|EMBL:ABL91815.1}; EC=1.1.1.93 {ECO:0000313|EMBL:ABL91815.1};; TaxID=189918 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain KMS).;"
Tartrate dehydrogenase n=1 Tax=Mycobacterium sp. (strain JLS) RepID=A3PZR7_MYCSJ
Displaying 26 items

View Taxonomy