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S3-16-all-fractions_k255_2362169

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-16-all-fractions_k255_2362169_1
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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2..508
DNA (507bp) protein (169aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
Dihydroxy-acid dehydratase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWD8_RUBXD
ilvD: dihydroxy-acid dehydratase
S3-16-all-fractions_k255_2362169_2
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(513..1007)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1U2_CONWI
Hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:AHY47765.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
S3-16-all-fractions_k255_2362169_3
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(1146..2228)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000373CE04
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY46606.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
S3-16-all-fractions_k255_2362169_4
unknown

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comp(2537..2737)
DNA (201bp) protein (67aa)

This feature has no annotations

S3-16-all-fractions_k255_2362169_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(2788..3882)
DNA (1095bp) protein (365aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000255|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00016};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=RUVB_RUBXD
S3-16-all-fractions_k255_2362169_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(3879..4469)
DNA (591bp) protein (197aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000255|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00031};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=RUVA_RUBXD
Holliday junction DNA helicase subunit RuvA
S3-16-all-fractions_k255_2362169_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(4494..5015)
DNA (522bp) protein (174aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; EC=3.1.22.4 {ECO:0000255|HAMAP-Rule:MF_00034};; Holliday junction nuclease RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=RUVC_RUBXD
crossover junction endodeoxyribonuclease RuvC
S3-16-all-fractions_k255_2362169_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(5141..6364)
DNA (1224bp) protein (408aa)
Cytochrome P450 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVR9_9CHLR
Cytochrome P450 {ECO:0000313|EMBL:EFH84302.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
S3-16-all-fractions_k255_2362169_9
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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comp(6607..8019)
DNA (1413bp) protein (471aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF04_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KIF29482.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
EmrB/QacA subfamily drug resistance transporter
S3-16-all-fractions_k255_2362169_10
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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8071..9207
DNA (1137bp) protein (379aa)
Transcriptional regulator, LacI family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B3G0_HERA2
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:AHY47166.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
S3-16-all-fractions_k255_2362169_11
unknown

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comp(9277..10431)
DNA (1155bp) protein (385aa)

This feature has no annotations

S3-16-all-fractions_k255_2362169_12
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(10500..10712)
DNA (213bp) protein (71aa)
Probable transcriptional regulatory protein Rxyl_1318 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Y1318_RUBXD
TIGR01033: DNA-binding regulatory protein, YebC/PmpR family
Probable transcriptional regulatory protein RradSPS_1294 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
Displaying 12 items

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