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S3-18-all-fractions_k255_1746837

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_1746837_1
unknown

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1..180
DNA (180bp) protein (60aa)

This feature has no annotations

S3-18-all-fractions_k255_1746837_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(229..1200)
DNA (972bp) protein (324aa)
alias=16ft_combo_ws3_scaffold_11554_18 id=24440502 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
S3-18-all-fractions_k255_1746837_3
unknown

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comp(1344..1508)
DNA (165bp) protein (55aa)

This feature has no annotations

S3-18-all-fractions_k255_1746837_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1716..2846
DNA (1131bp) protein (377aa)
Putative S9C family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAA0_GEMAT
putative S9C family peptidase
Putative S9C family peptidase {ECO:0000313|EMBL:AHG89366.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1746837_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3154..3684)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036DD6B4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92948.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1746837_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3989..4156
DNA (168bp) protein (56aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
S3-18-all-fractions_k255_1746837_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4664..5569)
DNA (906bp) protein (302aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FWF0_STIAD
LytTr DNA-binding region
LytTr DNA-binding region {ECO:0000313|EMBL:AHG89633.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1746837_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5601..6257)
DNA (657bp) protein (219aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88794.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1746837_9
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

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comp(6268..6792)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E1C3_GEOSM
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
S3-18-all-fractions_k255_1746837_10
unknown

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comp(6789..7298)
DNA (510bp) protein (170aa)

This feature has no annotations

S3-18-all-fractions_k255_1746837_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7295..7912)
DNA (618bp) protein (206aa)
RNA polymerase sigma-E factor id=1709623 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA polymerase ECF-type sigma factor
Tax=GWA2_Rokubacteria_73_35_curated
S3-18-all-fractions_k255_1746837_12
Caenorhabditis remanei, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

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8255..8884
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Caenorhabditis remanei RepID=E3M7I8_CAERE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFO93708.1}; TaxID=31234 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis remanei (Caenorhabditis vulgaris).;"
S3-18-all-fractions_k255_1746837_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9117..10271)
DNA (1155bp) protein (385aa)
Signal transduction ATPase n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2JUD5_9GAMM
histidine kinase internal region
Histidine kinase internal region {ECO:0000313|EMBL:AHG92950.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1746837_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(10275..11504)
DNA (1230bp) protein (410aa)
putative asparaginase
Peptidase T2 asparaginase 2 id=2732542 bin=GWC2_Ignavibacteria_56_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S3-18-all-fractions_k255_1746837_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11633..12031
DNA (399bp) protein (133aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92058.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1746837_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12043..14907
DNA (2865bp) protein (955aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GLX3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHG92046.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
S3-18-all-fractions_k255_1746837_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14904..16628
DNA (1725bp) protein (575aa)
Xylosidase/arabinosidase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGI3_PHEZH
glycoside hydrolase family 43
Glycoside hydrolase family 43 {ECO:0000313|EMBL:AHG92052.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_1746837_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16639..17646
DNA (1008bp) protein (336aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Aldose 1-epimerase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MYP4_CORCM
Aldose 1-epimerase
S3-18-all-fractions_k255_1746837_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17698..18132
DNA (435bp) protein (145aa)
beta-glucosidase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DC0D
glycoside hydrolase family 3 domain protein
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:AHG88100.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 19 items

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