ggKbase home page

S3-18-all-fractions_k255_3769782

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_3769782_1
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1908)
DNA (1908bp) protein (636aa)
Putative arylsulfatase atsD {ECO:0000313|EMBL:CCV14376.1}; EC=3.1.6.1 {ECO:0000313|EMBL:CCV14376.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
atsD; Putative arylsulfatase AtsD (aryl-sulfate sulphohydrolase) (arylsulphatase) (EC:3.1.6.1)
Putative arylsulfatase atsD n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDH2_9RHIZ
S3-18-all-fractions_k255_3769782_2

Not on your lists

comp(1999..2379)
DNA (381bp) protein (127aa)
lipoprotein n=1 Tax=Pseudomonas sp. S9 RepID=UPI0002557194
Marine sediment metagenome DNA, contig: S03H2_S05273 {ECO:0000313|EMBL:GAH48762.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S3-18-all-fractions_k255_3769782_3
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2437..5037)
DNA (2601bp) protein (867aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
UPI0003CF599B related cluster n=1 Tax=unknown RepID=UPI0003CF599B
PAS/PAC sensor signal transduction histidine kinase
S3-18-all-fractions_k255_3769782_4
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5115..5618)
DNA (504bp) protein (168aa)
Response regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J2PGM7_9SPHN
Response regulator {ECO:0000313|EMBL:EJL26442.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
ttrR; response regulator protein
S3-18-all-fractions_k255_3769782_5
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5775..6806
DNA (1032bp) protein (344aa)
NapD-like protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFL2_METS4
NapD-like protein
NapD-like protein {ECO:0000313|EMBL:ACA15721.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
S3-18-all-fractions_k255_3769782_6
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6827..8224
DNA (1398bp) protein (466aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
glutamate decarboxylase n=1 Tax=Pseudomonas sp. PAMC 26793 RepID=UPI000315D775
Glutamate decarboxylase
S3-18-all-fractions_k255_3769782_7
Vibrio sp. ER1A, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8235..9953
DNA (1719bp) protein (573aa)
Integral membrane protein with TrkA domains n=1 Tax=Vibrio shilonii AK1 RepID=A6D0R2_9VIBR
Transporter {ECO:0000313|EMBL:KFA95889.1}; TaxID=1517681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. ER1A.;"
YidE/YbjL protein
S3-18-all-fractions_k255_3769782_8
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9980..10810
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J0U7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFA86808.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
S3-18-all-fractions_k255_3769782_9
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10821..12053
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035D8FDB
Porin {ECO:0000313|EMBL:KIO44342.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
S3-18-all-fractions_k255_3769782_10
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12217..12948
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IMU0_9PLAN
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
multiple antibiotic resistance MarC-related protein
S3-18-all-fractions_k255_3769782_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13112..14146
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJ54_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63743.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
S3-18-all-fractions_k255_3769782_12
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14183..15067
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDW2_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS26908.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
S3-18-all-fractions_k255_3769782_13

Not on your lists

comp(15145..16383)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=uncultured bacterium F41-01 RepID=I3VIM7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AFK79233.1}; TaxID=1191437 species="Bacteria; environmental samples.;" source="uncultured bacterium F41-01.;"
hypothetical protein
S3-18-all-fractions_k255_3769782_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16505..16945)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGP3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO40993.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
Displaying 14 items

View Taxonomy