ggKbase home page

S3-18-all-fractions_k255_3894030

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_3894030_1
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

1..414
DNA (414bp) protein (138aa)
serine/threonine protein kinase id=24548954 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
serine/threonine protein kinase
Tax=RBG_13_Aminicenantes_63_10_curated
S3-18-all-fractions_k255_3894030_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

422..2284
DNA (1863bp) protein (621aa)
hydrolase CocE/NonD family protein
putative hydrolase; K06978 id=24485711 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S3-18-all-fractions_k255_3894030_3
unknown

Not on your lists

comp(2326..2841)
DNA (516bp) protein (172aa)

This feature has no annotations

S3-18-all-fractions_k255_3894030_4
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2910..3248)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0ITV8_MYCSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB21631.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
S3-18-all-fractions_k255_3894030_5
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

3336..5174
DNA (1839bp) protein (613aa)
peptidyl-dipeptidase A (EC:3.4.15.1)
Peptidyl-dipeptidase A {ECO:0000313|EMBL:AGY58470.1}; EC=3.4.15.1 {ECO:0000313|EMBL:AGY58470.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
Peptidyl-dipeptidase A n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QLC8_9CYAN
S3-18-all-fractions_k255_3894030_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5195..7630
DNA (2436bp) protein (812aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4L1_MYXSD
permease
Permease {ECO:0000313|EMBL:AHG89565.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_3894030_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7736..9190)
DNA (1455bp) protein (485aa)
UPI00029A4D33 related cluster n=1 Tax=unknown RepID=UPI00029A4D33 id=5225341 bin=16ft_combo_ws3_JS1 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
NAD-dependent epimerase/dehydratase
Tax=RBG_16_RIF_WS3X_71_46_curated
S3-18-all-fractions_k255_3894030_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9223..10203)
DNA (981bp) protein (327aa)
Transcriptional regulator, MerR family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNG1_OPITP
Uncharacterized protein {ECO:0000313|EMBL:ETW96141.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Methionine synthase B12-binding module cap domain protein
S3-18-all-fractions_k255_3894030_9
Pseudoalteromonas sp. ND6B, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10369..10926
DNA (558bp) protein (186aa)
Beta-Ig-H3/fasciclin n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R507_PIRSD
beta-Ig-H3/fasciclin
Beta-Ig-H3/fasciclin {ECO:0000313|EMBL:KGK01302.1}; Flags: Precursor;; TaxID=1535421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas sp. ND6B.;"
S3-18-all-fractions_k255_3894030_10
unknown

Not on your lists

11050..11202
DNA (153bp) protein (51aa)

This feature has no annotations

S3-18-all-fractions_k255_3894030_11
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(11189..12604)
DNA (1416bp) protein (472aa)
FAD-linked oxidase n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2LF00_9GAMM
FAD-linked oxidase
Tax=RBG_13_Caldithrix_44_9_curated
S3-18-all-fractions_k255_3894030_12
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12647..13222)
DNA (576bp) protein (192aa)
UPI0003CDF699 related cluster n=1 Tax=unknown RepID=UPI0003CDF699
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ESW81538.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
N-acetyltransferase GCN5
S3-18-all-fractions_k255_3894030_13
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13418..13717
DNA (300bp) protein (100aa)
Oxidoreductase {ECO:0000313|EMBL:CAC46573.1}; EC=1.-.-.- {ECO:0000313|EMBL:CAC46573.1};; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
oxidoreductase n=1 Tax=Rhizobium meliloti RepID=UPI0002F9B246
putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
S3-18-all-fractions_k255_3894030_14
unknown

Not on your lists

comp(13651..13965)
DNA (315bp) protein (105aa)

This feature has no annotations

S3-18-all-fractions_k255_3894030_15
unknown

Not on your lists

14354..15094
DNA (741bp) protein (247aa)

This feature has no annotations

S3-18-all-fractions_k255_3894030_16
unknown

Not on your lists

15138..15275
DNA (138bp) protein (46aa)

This feature has no annotations

S3-18-all-fractions_k255_3894030_17
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15267..16700)
DNA (1434bp) protein (478aa)
Transcriptional regulator, GntR family domain / Aspartate aminotransferase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TRT2_9DELT
Transcriptional regulator, GntR family domain / Aspartate aminotransferase protein {ECO:0000313|EMBL:ERK88094.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
GntR family transcriptional regulator
S3-18-all-fractions_k255_3894030_18
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

Not on your lists

comp(16845..19142)
DNA (2298bp) protein (766aa)
protein kinase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B719E4
protein kinase
Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
S3-18-all-fractions_k255_3894030_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19156..19551)
DNA (396bp) protein (132aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVZ3_HALO1
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_3894030_20
unknown

Not on your lists

19575..19880
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying 20 items

View Taxonomy