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S3-18-all-fractions_k255_4213702

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_4213702_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(246..1829)
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036BB1D9
Sodium/proton antiporter, CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:CDM66984.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
NhaP-type Na+/H+ and K+/H+ antiporter protein
S3-18-all-fractions_k255_4213702_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1864..3129)
DNA (1266bp) protein (422aa)
Kef-type K+ transport system, membrane component n=2 Tax=Singulisphaera acidiphila RepID=L0D6D2_SINAD
Kef-type K+ transport system membrane protein
Kef-type K+ transport system, membrane component {ECO:0000313|EMBL:AGA24822.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
S3-18-all-fractions_k255_4213702_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3285..3782
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK04_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87642.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_4213702_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3792..4883)
DNA (1092bp) protein (364aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0ECI8_THECK
dihydrodipicolinate synthetase
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:AHG87623.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_4213702_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4870..5916)
DNA (1047bp) protein (349aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAW9_9BACT
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AHG87622.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_4213702_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5966..6370)
DNA (405bp) protein (135aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91713.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_4213702_7
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6654..9092
DNA (2439bp) protein (813aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4L1_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC43098.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
S3-18-all-fractions_k255_4213702_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9142..9774)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Y9_GEMAT
glycoside hydrolase family 13 domain protein
Glycoside hydrolase family 13 domain protein {ECO:0000313|EMBL:AHG90698.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_4213702_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9779..10324)
DNA (546bp) protein (182aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3L0_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_4213702_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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10491..10982
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381170B
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S3-18-all-fractions_k255_4213702_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11078..11359
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IWW6_NOSP7
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_4213702_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11356..12948
DNA (1593bp) protein (531aa)
Putative sodium/solute symporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I5_GEMAT
putative sodium/solute symporter
Putative sodium/solute symporter {ECO:0000313|EMBL:BAH38195.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_4213702_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13090..14895
DNA (1806bp) protein (602aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U6_GEMAT
histidine kinase dimerization and phosphoacceptor region
Histidine kinase dimerization and phosphoacceptor region {ECO:0000313|EMBL:AHG87808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_4213702_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14892..15554
DNA (663bp) protein (221aa)
NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U5_GEMAT
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AHG87809.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_4213702_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15551..17611)
DNA (2061bp) protein (687aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Histidine kinase (EC:2.7.13.3) id=14429255 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ATP-binding region ATPase domain protein
S3-18-all-fractions_k255_4213702_16

Not on your lists

17813..20008
DNA (2196bp) protein (732aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFZ2_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:KKN19592.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ferrienterochelin and colicins outer membrane receptor
S3-18-all-fractions_k255_4213702_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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20018..20734
DNA (717bp) protein (239aa)
Hypothetical membrane protein id=1801697 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
S3-18-all-fractions_k255_4213702_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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20884..29688
DNA (8805bp) protein (2935aa)
protein ndvB n=1 Tax=Rhizobium giardinii RepID=UPI00035E4A94
Stenotrophomonas maltophilia strain ZBG7B contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87361.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
putative glycosyltransferase 36
S3-18-all-fractions_k255_4213702_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29894..31732
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8A1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92448.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_4213702_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

32037..34190
DNA (2154bp) protein (718aa)
phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A848_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S3-18-all-fractions_k255_4213702_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

34253..36088
DNA (1836bp) protein (612aa)
glgA; glycogen synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A847_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S3-18-all-fractions_k255_4213702_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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36090..37835
DNA (1746bp) protein (582aa)
putative alpha-amylase (EC:3.2.1.1)
Glycoside hydrolase family 57 id=3927648 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
S3-18-all-fractions_k255_4213702_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

37906..40152
DNA (2247bp) protein (749aa)
Glycoside hydrolase family protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZQ18_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AHG87964.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
alpha-amylase/alpha-mannosidase
S3-18-all-fractions_k255_4213702_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

40329..41546
DNA (1218bp) protein (406aa)
Probable lipoprotein id=3393305 bin=GWC2_Ignavibacteria_56_12 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_4213702_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

41543..41995
DNA (453bp) protein (151aa)
Rieske Fe-S protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEB0_ANADE
Rieske Fe-S protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
S3-18-all-fractions_k255_4213702_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

41995..43245
DNA (1251bp) protein (417aa)
Putative uncharacterized protein id=4178912 bin=GWA2_Ignavibacteria_55_11 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
S3-18-all-fractions_k255_4213702_27
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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43308..43781
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGY0_SINAD
Uncharacterized protein {ECO:0000313|EMBL:EYF02659.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
Displaying 27 items

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