ggKbase home page

S3-18-all-fractions_k255_5654100

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_5654100_1
unknown

Not on your lists

comp(1..207)
DNA (207bp) protein (69aa)

This feature has no annotations

S3-18-all-fractions_k255_5654100_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(415..1614)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE88_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93785.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5654100_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1739..2338)
DNA (600bp) protein (200aa)
Acetyltransferase (GNAT) domain n=1 Tax=uncultured organism RepID=T1W5C2_9ZZZZ
GCN5-related N-acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
S3-18-all-fractions_k255_5654100_4
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2682..3230
DNA (549bp) protein (183aa)
DinB family protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KCE7_9BACT
damage-inducible protein DinB
Damage-inducible protein DinB {ECO:0000313|EMBL:AKD02338.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
S3-18-all-fractions_k255_5654100_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3364..5034
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S5_GEMAT
Amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:AHG89988.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5654100_6
unknown

Not on your lists

5031..5423
DNA (393bp) protein (131aa)

This feature has no annotations

S3-18-all-fractions_k255_5654100_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5426..6382
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37584.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5654100_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6452..6808)
DNA (357bp) protein (119aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S3_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH37583.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5654100_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6816..7895
DNA (1080bp) protein (360aa)
Peptidase M42 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S2_GEMAT
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:AHG89987.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5654100_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7908..9650)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37581.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5654100_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9821..11146
DNA (1326bp) protein (442aa)
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AHG89985.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M28 id=12555661 bin=CNBR_ACIDO species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
S3-18-all-fractions_k255_5654100_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11143..12540
DNA (1398bp) protein (466aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NF3_SOLUE
Xaa-Pro dipeptidase family enzyme {ECO:0000313|EMBL:KFE66891.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
amidohydrolase
S3-18-all-fractions_k255_5654100_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12592..13494
DNA (903bp) protein (301aa)
Histone deacetylase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACF0_GEMAT
Histone deacetylase domain protein
Histone deacetylase domain protein {ECO:0000313|EMBL:AHG89983.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5654100_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(13615..14271)
DNA (657bp) protein (219aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S3-18-all-fractions_k255_5654100_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14496..15407
DNA (912bp) protein (304aa)
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S0_GEMAT
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:AHG89982.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5654100_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15421..15879
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37579.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5654100_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15986..17779
DNA (1794bp) protein (598aa)
DNA polymerase X family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R8_GEMAT
PHP domain protein
PHP domain protein {ECO:0000313|EMBL:AHG89981.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5654100_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17814..18617
DNA (804bp) protein (268aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Endonuclease III n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R7_GEMAT
endonuclease III
S3-18-all-fractions_k255_5654100_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18650..19108
DNA (459bp) protein (153aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R6_GEMAT
peptidyl-prolyl cis-trans isomerase cyclophilin type
S3-18-all-fractions_k255_5654100_20
unknown

Not on your lists

19137..19277
DNA (141bp) protein (47aa)

This feature has no annotations

S3-18-all-fractions_k255_5654100_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19391..20590)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAU0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39346.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5654100_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20667..21371
DNA (705bp) protein (235aa)
TetR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R4_GEMAT
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AHG89975.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5654100_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21368..22756
DNA (1389bp) protein (463aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R3_GEMAT
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG89974.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5654100_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22798..23916
DNA (1119bp) protein (373aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R2_GEMAT
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:AHG89973.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5654100_25
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23922..25550
DNA (1629bp) protein (543aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R1_GEMAT
multidrug resistance protein
Multidrug resistance protein {ECO:0000313|EMBL:BAH37571.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5654100_26
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25555..26097
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MSC2_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE04734.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
S3-18-all-fractions_k255_5654100_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26202..26807
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R0_GEMAT
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AHG89970.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5654100_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26870..27466
DNA (597bp) protein (199aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH37569.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5654100_29
unknown

Not on your lists

27463..27849
DNA (387bp) protein (129aa)

This feature has no annotations

S3-18-all-fractions_k255_5654100_30
CSP1_5_NC10, NC10, Bacteria

Not on your lists

27862..28230
DNA (369bp) protein (123aa)
hypothetical protein id=14430239 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
Displaying items 1-30 of 31 in total

View Taxonomy