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S3-18-all-fractions_k255_5684890

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_5684890_1

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1..120
DNA (120bp) protein (40aa)
Marine sediment metagenome DNA, contig: S06H3_S00460 {ECO:0000313|EMBL:GAI25489.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
S3-18-all-fractions_k255_5684890_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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582..2144
DNA (1563bp) protein (521aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4L3_GEMAT
oxidoreductase domain protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG88668.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5684890_3
unknown

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comp(2267..2644)
DNA (378bp) protein (126aa)

This feature has no annotations

S3-18-all-fractions_k255_5684890_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2687..3022)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H4I5_PSEAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88618.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5684890_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3121..3867)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4X4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37284.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5684890_6
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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4223..6682
DNA (2460bp) protein (820aa)
Transmembrane domain containing protein n=2 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PRP7_MEIRD
transmembrane domain-containing protein
Strain A contig00020, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ55018.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber.;"
S3-18-all-fractions_k255_5684890_7
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6858..7634
DNA (777bp) protein (259aa)
Methylase involved in ubiquinone/menaquinone biosynthesis-like id=4518199 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ABO60544.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
S3-18-all-fractions_k255_5684890_8
Methanoculleus sp. MH98A, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7661..9109)
DNA (1449bp) protein (483aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CX60_METMJ
MFS transporter {ECO:0000313|EMBL:KDE56498.1}; TaxID=1495314 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus sp. MH98A.;"
major facilitator transporter
S3-18-all-fractions_k255_5684890_9
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9507..10550
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F96F35
glycosyl transferase family protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
S3-18-all-fractions_k255_5684890_10
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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10554..11879
DNA (1326bp) protein (442aa)
Phosphoheptose isomerase {ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|SAAS:SAAS00089180};; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
Phosphoheptose isomerase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XK30_9CHRO
Phosphoheptose isomerase
S3-18-all-fractions_k255_5684890_11
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11876..12502
DNA (627bp) protein (209aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=536230 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei MSHR346.;"
D,D-heptose 1,7-bisphosphate phosphatase n=4 Tax=Burkholderia pseudomallei RepID=C4I3V5_BURPE
haloacid dehalogenase
S3-18-all-fractions_k255_5684890_12
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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12499..13629
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0003180BF7
Uncharacterized protein {ECO:0000313|EMBL:EYB69158.1}; TaxID=1476583 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
glycosyl transferase family 9
S3-18-all-fractions_k255_5684890_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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13639..15399
DNA (1761bp) protein (587aa)
Carbamoyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9T3_SPHTD
carbamoyltransferase
Carbamoyltransferase {ECO:0000313|EMBL:ACZ40576.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
S3-18-all-fractions_k255_5684890_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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15396..16367
DNA (972bp) protein (324aa)
Glycosyl transferase family 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9T2_SPHTD
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACZ40575.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
S3-18-all-fractions_k255_5684890_15
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

16364..17398
DNA (1035bp) protein (345aa)
Radical SAM domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9T1_SPHTD
Radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ACZ40574.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
S3-18-all-fractions_k255_5684890_16
unknown

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17703..18137
DNA (435bp) protein (145aa)

This feature has no annotations

S3-18-all-fractions_k255_5684890_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18134..19351
DNA (1218bp) protein (406aa)
UPI0003CDFD14 related cluster n=1 Tax=unknown RepID=UPI0003CDFD14
natural resistance-associated macrophage protein
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:AHG89148.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5684890_18
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

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19354..19716
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9UAT5_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY91304.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
S3-18-all-fractions_k255_5684890_19
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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19718..20098
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U8E5_CYAP2
Uncharacterized protein {ECO:0000313|EMBL:KIF37047.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
S3-18-all-fractions_k255_5684890_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(20124..22757)
DNA (2634bp) protein (878aa)
TonB-dependent outer membrane receptor n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0T4_GRAFK
TonB-dependent outer membrane protein, SusC/RagA
TonB-dependent outer membrane protein, SusC/RagA {ECO:0000313|EMBL:AHG89359.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5684890_21
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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23030..23437
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MR55_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPJ35977.1}; TaxID=1283301 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
hypothetical protein
S3-18-all-fractions_k255_5684890_22
unknown

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23516..23695
DNA (180bp) protein (60aa)

This feature has no annotations

S3-18-all-fractions_k255_5684890_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(23712..24023)
DNA (312bp) protein (104aa)
Antibiotic biosynthesis monooxygenase domain protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IH84_KORVE
Antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AHG92474.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5684890_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(24150..26024)
DNA (1875bp) protein (625aa)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A875_GEMAT
ATP-dependent metalloprotease FtsH
ATP-dependent metalloprotease FtsH {ECO:0000313|EMBL:AHG90571.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5684890_25
unknown

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comp(26621..26773)
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 25 items

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