ggKbase home page

S3-18-all-fractions_k255_5548284_19

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 16923..17462

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEL3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 170.0
  • Bit_score: 165
  • Evalue 3.10e-38
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 177.0
  • Bit_score: 171
  • Evalue 2.10e-40
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 177.0
  • Bit_score: 171
  • Evalue 1.00e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 540
ATGAGCGCAATCGACATGTCGATCGTTCAGCGCGCGAAACGTGGCGATCGTGCCGCGTTCGCGGAGCTGGTCGATTTCTATTACGCGCGCTGCCTACGCTTCGCCGTCCACATGCTCGGCAATTCGCAGGATGCCGAGGAAGCGGTGCAGGACACCTTCGTGCGCGTACACGGGGCGTTGAACCGCTACGATGAGTTCGACCGGTTCGAGTCATGGCTGTTCCGCATCCTCGCGAACCGCTGTCGGACGATGATGGGGCGCGAAGCACGCCGGTCGCGCGTGCTCGTCTACGGTGACTTGCCGCACGACCGTGGAACCGCCCCCGATGTGGACGCGATGGTGTGGCGCGAAGAGATCCAGACGGCATTGAGCACGCTACCAGCGGCGCAGCGCGAAGCATTCCTGCTGCGCCACATCGAGGGACTCGAGTACGAGGAAATGGGACGGATCACTGGGGCCGGAGTATCGGCGCTGAAGATGCGAGTCAAACGCGCCTGTGAGTTTCTGCGGATGCGTCTCGCGGAGGTGGAACGTGCGTGA
PROTEIN sequence
Length: 180
MSAIDMSIVQRAKRGDRAAFAELVDFYYARCLRFAVHMLGNSQDAEEAVQDTFVRVHGALNRYDEFDRFESWLFRILANRCRTMMGREARRSRVLVYGDLPHDRGTAPDVDAMVWREEIQTALSTLPAAQREAFLLRHIEGLEYEEMGRITGAGVSALKMRVKRACEFLRMRLAEVERA*