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S3-18-all-fractions_k255_5548284

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_5548284_1
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..344)
DNA (342bp) protein (114aa)
Arginase family protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L0T9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EYR66078.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
arginase
S3-18-all-fractions_k255_5548284_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(449..1621)
DNA (1173bp) protein (391aa)
Chorismate mutase/prephenate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8E2_GEMAT
Prephenate dehydrogenase
Prephenate dehydrogenase {ECO:0000313|EMBL:AHG90071.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5548284_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1664..3424)
DNA (1761bp) protein (587aa)
Gamma-glutamyltranspeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAF9_GEMAT
gamma-glutamyltranspeptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S3-18-all-fractions_k255_5548284_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3446..4378)
DNA (933bp) protein (311aa)
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG92450.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=24515767 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
S3-18-all-fractions_k255_5548284_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4556..5035
DNA (480bp) protein (160aa)
Hypothetical conserved protein n=1 Tax=uncultured planctomycete RepID=H5SFQ1_9BACT
thiamine pyrophosphate TPP-binding domain-containing protein
Thiamine pyrophosphate TPP-binding domain-containing protein {ECO:0000313|EMBL:AHG93678.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5548284_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5032..5664
DNA (633bp) protein (211aa)
Hypothetical conserved protein n=1 Tax=uncultured planctomycete RepID=H5SFQ2_9BACT
thiamine pyrophosphate TPP-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S3-18-all-fractions_k255_5548284_7
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5661..6269)
DNA (609bp) protein (203aa)
Transcriptional regulator, TetR family n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DRD2_THIND
dhaR_[H]; Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGA32149.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
S3-18-all-fractions_k255_5548284_8
unknown

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comp(6419..6859)
DNA (441bp) protein (147aa)

This feature has no annotations

S3-18-all-fractions_k255_5548284_9
unknown

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7019..7426
DNA (408bp) protein (136aa)

This feature has no annotations

S3-18-all-fractions_k255_5548284_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7586..8656
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Z1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39589.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5548284_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8846..10306
DNA (1461bp) protein (487aa)
Peptidase M48 Ste24p n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HB62_ANADF
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:ABS25958.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
S3-18-all-fractions_k255_5548284_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10389..11165
DNA (777bp) protein (259aa)
Peptidase, S54 family n=1 Tax=Leptospira weilii serovar Ranarum str. ICFT RepID=N1WGH0_9LEPT
Peptidase S54, rhomboid domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S3-18-all-fractions_k255_5548284_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11212..11694)
DNA (483bp) protein (161aa)
Sulfur-regulated protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DLM2_BRAJP
magnesium transporter
Sulfur-regulated protein {ECO:0000313|EMBL:BAL11298.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
S3-18-all-fractions_k255_5548284_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11700..12050
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9J2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39169.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5548284_15
unknown

Not on your lists

12060..12812
DNA (753bp) protein (251aa)
hypothetical protein
S3-18-all-fractions_k255_5548284_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12837..14171
DNA (1335bp) protein (445aa)
membrane dipeptidase (EC:3.4.13.19)
Membrane dipeptidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020I3_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
S3-18-all-fractions_k255_5548284_17
unknown

Not on your lists

comp(14353..14958)
DNA (606bp) protein (202aa)

This feature has no annotations

S3-18-all-fractions_k255_5548284_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(15062..16636)
DNA (1575bp) protein (525aa)
Hydrolase id=4085397 bin=GWA2_Methylomirabilis_73_35 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S3-18-all-fractions_k255_5548284_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16923..17462
DNA (540bp) protein (180aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEL3_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5548284_20
unknown

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17455..18054
DNA (600bp) protein (200aa)

This feature has no annotations

Displaying 20 items

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