ggKbase home page

S3-18-all-fractions_k255_208849

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_208849_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

3..227
DNA (225bp) protein (75aa)
Integral membrane protein TerC n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B166_HERA2
integral membrane protein TerC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S3-18-all-fractions_k255_208849_2
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(232..1656)
DNA (1425bp) protein (475aa)
UDP-N-acetylmuramate id=2274517 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diamino pimelate ligase
Tax=CG_Delta_02
S3-18-all-fractions_k255_208849_3
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

1737..2753
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000382121D
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_208849_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2913..3107
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Haladaptatus paucihalophilus RepID=UPI00035DCA6D
Uncharacterized protein {ECO:0000313|EMBL:EFW91921.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;"
hypothetical protein
S3-18-all-fractions_k255_208849_5
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3122..3949)
DNA (828bp) protein (276aa)
RNAse PH (EC:2.7.7.56)
ribonuclease PH n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003457C3F
Tax=GWE1_Burkholderiales_65_30_curated
S3-18-all-fractions_k255_208849_6
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

4078..5607
DNA (1530bp) protein (510aa)
Glr2979 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NCJ9_GLOVI
hypothetical protein
Glr2979 protein {ECO:0000313|EMBL:BAC90920.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
S3-18-all-fractions_k255_208849_7
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5610..6407
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y434_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDI01778.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
nickel uptake transporter family protein
S3-18-all-fractions_k255_208849_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6506..7027
DNA (522bp) protein (174aa)
Gll2708 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NH29_GLOVI
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RNA polymerase ECF-type (group 3) sigma factor
S3-18-all-fractions_k255_208849_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

7035..7835
DNA (801bp) protein (267aa)
putative anti-sigma factor id=14627484 bin=bin7_NC10_sister species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
putative transmembrane anti-sigma factor
Tax=RBG_16_Acidobacteria_70_10_curated
S3-18-all-fractions_k255_208849_10
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

7874..8896
DNA (1023bp) protein (341aa)
phosphotransacetylase (EC:2.3.1.8)
Phosphotransacetylase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHJ1_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:KDA53259.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
S3-18-all-fractions_k255_208849_11
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8893..10167
DNA (1275bp) protein (425aa)
phosphoribosylamine/glycine ligase (EC:4.1.1.21 6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8J6_THEID
Tax=GWA2_Deltaproteobacteria_54_12_curated
S3-18-all-fractions_k255_208849_12
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10346..11053
DNA (708bp) protein (236aa)
PSP1 domain protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E2H2_GEOSM
PSP1 superfamily protein
PSP1 superfamily protein {ECO:0000313|EMBL:ACH40205.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622).;"
S3-18-all-fractions_k255_208849_13
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

11074..11418
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CR9_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:KDA53256.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
S3-18-all-fractions_k255_208849_14
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11399..12514
DNA (1116bp) protein (372aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QZ32_CHRSD
4-hydroxythreonine-4-phosphate dehydrogenase
S3-18-all-fractions_k255_208849_15
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

12520..13743
DNA (1224bp) protein (408aa)
cysteine desulfurase n=1 Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B7A12F
cysteine desulfurase
Cysteine desulfurase family protein, VC1184 subfamily {ECO:0000313|EMBL:AFM22191.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA).;"
S3-18-all-fractions_k255_208849_16
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13952..15301)
DNA (1350bp) protein (450aa)
Putative outermembrane protein (Modular protein) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIB8_9BACT
outermembrane protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
S3-18-all-fractions_k255_208849_17
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15351..16133
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SRX8_PLABD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY60294.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
S3-18-all-fractions_k255_208849_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16130..17107
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EUT2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91128.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
S3-18-all-fractions_k255_208849_19
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

17104..18741
DNA (1638bp) protein (546aa)
FAD linked oxidase domain protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QH30_DESB2
FAD linked oxidase domain-containing protein
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_208849_20
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

18742..20376
DNA (1635bp) protein (545aa)
glycerol-3-phosphate dehydrogenase 2; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] id=24443403 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
glpD; glycerol-3-phosphate dehydrogenase
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_208849_21
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(20360..20776)
DNA (417bp) protein (139aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
Ribonuclease VapC n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4W1_OCEP5
pilt protein domain protein
S3-18-all-fractions_k255_208849_22
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(20773..21033)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4W0_OCEP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR37177.1}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
S3-18-all-fractions_k255_208849_23
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21191..22756
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000344B94F
hypothetical protein
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
S3-18-all-fractions_k255_208849_24
unknown

Not on your lists

comp(22842..23102)
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 24 items

View Taxonomy