ggKbase home page

S3-18-all-fractions_k255_319735

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_319735_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2..322)
DNA (321bp) protein (107aa)
Chaperone protein DnaK n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=DNAK_SOLUE
dnaK; molecular chaperone DnaK
Chaperone protein DnaK {ECO:0000255|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000255|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000255|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000255|HAMAP-Rule:MF_00332}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
S3-18-all-fractions_k255_319735_2
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(475..1671)
DNA (1197bp) protein (399aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53709.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein id=14428663 bin=bin3_NC10 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
transmembrane protein
S3-18-all-fractions_k255_319735_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(1690..3432)
DNA (1743bp) protein (581aa)
Tetratricopeptide repeat family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FVV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KDA53710.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
S3-18-all-fractions_k255_319735_4
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3413..3898)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IG80_PHYMF
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
S3-18-all-fractions_k255_319735_5
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4022..4807
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003199833
MazG family protein
Tax=RBG_16_Deltaproteobacteria_54_18_curated
S3-18-all-fractions_k255_319735_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4814..5539)
DNA (726bp) protein (242aa)
Lysophospholipase (EC:3.1.1.5)
Lysophospholipase {ECO:0000313|EMBL:AEN72485.1}; EC=3.1.1.5 {ECO:0000313|EMBL:AEN72485.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Lysophospholipase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEK7_RHOMR
S3-18-all-fractions_k255_319735_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

5596..6354
DNA (759bp) protein (253aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ65_CHLTF
antimicrobial peptide ABC transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S3-18-all-fractions_k255_319735_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6351..8948
DNA (2598bp) protein (866aa)
Putative Uncharacterized ABC-type transport system, permease component YbbP id=3112911 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative ABC transporter permease YbbP
Tax=GWC2_Rokubacteria_70_16_curated
S3-18-all-fractions_k255_319735_9
GWA2_OP11_47_9, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(8954..11299)
DNA (2346bp) protein (782aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q7K0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKU88862.1}; TaxID=1618445 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_47_9.;"
S3-18-all-fractions_k255_319735_10
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11316..12329)
DNA (1014bp) protein (338aa)
hypothetical protein; K09798 hypothetical protein id=15192558 bin=GWC2_NOV_55_46 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
S3-18-all-fractions_k255_319735_11
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(12295..13479)
DNA (1185bp) protein (395aa)
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SH86_9BACT
Carboxyl-terminal protease {ECO:0000313|EMBL:BAL55522.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
S3-18-all-fractions_k255_319735_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(13476..14621)
DNA (1146bp) protein (382aa)
Peptidase M23B n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2V1_DESAC
zinc metalloendopeptidase M23 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S3-18-all-fractions_k255_319735_13
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14618..16702)
DNA (2085bp) protein (695aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase, serine peptidase, MEROPS family S09A n=1 Tax=Moorea producens 3L RepID=F4XIY9_9CYAN
Prolyl oligopeptidase, serine peptidase, MEROPS family S09A {ECO:0000313|EMBL:EGJ35446.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
S3-18-all-fractions_k255_319735_14
unknown

Not on your lists

comp(16769..18622)
DNA (1854bp) protein (618aa)

This feature has no annotations

S3-18-all-fractions_k255_319735_15
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18647..20023
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036AFC1F
sulfatase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
S3-18-all-fractions_k255_319735_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20095..22527
DNA (2433bp) protein (811aa)
Permease n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXW4_OPITP
permease
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S3-18-all-fractions_k255_319735_17
unknown

Not on your lists

comp(22600..23163)
DNA (564bp) protein (188aa)

This feature has no annotations

S3-18-all-fractions_k255_319735_18
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23160..24353)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z8N1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDI01899.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
S3-18-all-fractions_k255_319735_19
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24418..24894)
DNA (477bp) protein (159aa)
molybdenum cofactor biosynthesis protein MoaC n=1 Tax=Streptomyces rapamycinicus RepID=UPI000382FB32
molybdenum cofactor biosynthesis protein MoaC
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1343740 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
S3-18-all-fractions_k255_319735_20
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

24929..25615
DNA (687bp) protein (229aa)
Hypothetical conserved protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SG61_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL55147.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
glycosyl transferase family 2
S3-18-all-fractions_k255_319735_21
Streptococcus sp. M334, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25753..26055)
DNA (303bp) protein (101aa)
Nucleoid DNA-binding protein n=13 Tax=Lactobacillus rhamnosus RepID=B5QPD7_LACRH
hup; DNA-binding protein HU
DNA-binding protein HU-beta {ECO:0000313|EMBL:EFX59544.1}; TaxID=563038 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. M334.;"
S3-18-all-fractions_k255_319735_22
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(26157..27554)
DNA (1398bp) protein (466aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCJ9_9BACT
ribosomal RNA small subunit methyltransferase B
S3-18-all-fractions_k255_319735_23
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27566..28519)
DNA (954bp) protein (318aa)
Methionyl-tRNA formyltransferase {ECO:0000255|HAMAP-Rule:MF_00182}; EC=2.1.2.9 {ECO:0000255|HAMAP-Rule:MF_00182};; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Methionyl-tRNA formyltransferase n=2 Tax=Geobacter metallireducens RepID=FMT_GEOMG
fmt; methionyl-tRNA formyltransferase
S3-18-all-fractions_k255_319735_24
Bacillus sp. 1NLA3E, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28627..29832)
DNA (1206bp) protein (402aa)
RHS repeat-associated core domain-containing protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D9C0
mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein
Mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein {ECO:0000313|EMBL:AGK55741.1}; TaxID=666686 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 1NLA3E.;"
S3-18-all-fractions_k255_319735_25
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(29963..30922)
DNA (960bp) protein (320aa)
putative deacetylase, histone deacetylase family
Putative Deacetylase, histone deacetylase family id=3714594 bin=GWA2_OP3_52_12 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
S3-18-all-fractions_k255_319735_26
unknown

Not on your lists

comp(30930..31598)
DNA (669bp) protein (223aa)

This feature has no annotations

S3-18-all-fractions_k255_319735_27
unknown

Not on your lists

comp(31726..32196)
DNA (471bp) protein (157aa)

This feature has no annotations

S3-18-all-fractions_k255_319735_28
unknown

Not on your lists

comp(32198..32461)
DNA (264bp) protein (88aa)

This feature has no annotations

S3-18-all-fractions_k255_319735_29
unknown

Not on your lists

comp(32458..34269)
DNA (1812bp) protein (604aa)

This feature has no annotations

S3-18-all-fractions_k255_319735_30
unknown

Not on your lists

34667..34813
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying items 1-30 of 59 in total

View Taxonomy