ggKbase home page

S3-18-all-fractions_k255_332652

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_332652_1
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3..1331)
DNA (1329bp) protein (443aa)
peptidase M16 n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4927C
peptidase M16 domain protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S3-18-all-fractions_k255_332652_2
bacterium UASB270, Bacteria

Not on your lists

comp(1397..1684)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003666C7D
Uncharacterized protein {ECO:0000313|EMBL:GAK60615.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
S3-18-all-fractions_k255_332652_3
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1681..1947)
DNA (267bp) protein (89aa)
acetyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC493
Uncharacterized protein {ECO:0000313|EMBL:EQB09038.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
S3-18-all-fractions_k255_332652_4
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1973..5107)
DNA (3135bp) protein (1045aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000366A97A
PAS domain-containing protein
S3-18-all-fractions_k255_332652_5
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(5221..5823)
DNA (603bp) protein (201aa)
MobA-like protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] id=1245158 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
MobA-like protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
S3-18-all-fractions_k255_332652_6
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

6052..6675
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZ57_ROSS1
hypothetical protein
Tax=RBG_16_Chloroflexi_57_9_curated
S3-18-all-fractions_k255_332652_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(6700..8664)
DNA (1965bp) protein (655aa)
Oligopeptide transporter, OPT family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQA4_HALO1
oligopeptide transporter OPT family
Tax=RBG_16_Acidobacteria_70_10_curated
S3-18-all-fractions_k255_332652_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8716..9960)
DNA (1245bp) protein (415aa)
ATPase id=4950427 bin=GWC2_Proteo_65_14_Ab886 species=Thermus thermophilus genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
putative GTP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S3-18-all-fractions_k255_332652_9
unknown

Not on your lists

comp(10003..10233)
DNA (231bp) protein (77aa)

This feature has no annotations

S3-18-all-fractions_k255_332652_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10419..10730)
DNA (312bp) protein (104aa)
Putative integron gene cassette protein (Fragment) n=1 Tax=uncultured bacterium RepID=B0BHK2_9BACT
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
S3-18-all-fractions_k255_332652_11
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(10743..11081)
DNA (339bp) protein (113aa)
antibiotic biosynthesis monooxygenase id=1245775 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
antibiotic biosynthesis monooxygenase
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
S3-18-all-fractions_k255_332652_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11094..12131)
DNA (1038bp) protein (346aa)
UniRef90_D6U5B8 Molybdopterin dehydrogenase FAD-binding n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B8_9CHLR id=1247860 bin=RBG9 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S3-18-all-fractions_k255_332652_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12131..14713)
DNA (2583bp) protein (861aa)
pth:PTH_1538 CoxL; aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs id=1247861 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_332652_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14726..15370)
DNA (645bp) protein (215aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein id=14627889 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
S3-18-all-fractions_k255_332652_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15367..16035)
DNA (669bp) protein (223aa)
Transcriptional regulator id=3072646 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TetR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S3-18-all-fractions_k255_332652_16
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16522..17661
DNA (1140bp) protein (380aa)
Radical SAM domain protein n=1 Tax=uncultured bacterium A1Q1_fos_1000 RepID=L7VVS9_9BACT
radical SAM domain-containing protein
Tax=GWF2_Bacteroidetes_43_11_curated
S3-18-all-fractions_k255_332652_17
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17687..18598
DNA (912bp) protein (304aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
Aspartate carbamoyltransferase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFQ0_9CHLR
pyrB; aspartate carbamoyltransferase
S3-18-all-fractions_k255_332652_18

Not on your lists

18595..19176
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_1000 RepID=L7VZ65_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC71415.1}; TaxID=1256536 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1000.;"
hypothetical protein
Displaying 18 items

View Taxonomy