ggKbase home page

S3-18-all-fractions_k255_716928

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_716928_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..768)
DNA (768bp) protein (256aa)
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter transmembrane region
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S3-18-all-fractions_k255_716928_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(829..1914)
DNA (1086bp) protein (362aa)
Putative phosphoslipid binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ85_KORVE
phophoslipid binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S3-18-all-fractions_k255_716928_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2057..2530)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003754CEC
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
S3-18-all-fractions_k255_716928_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2591..2896)
DNA (306bp) protein (102aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N7R0_9GAMM
yidD; YidD
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S3-18-all-fractions_k255_716928_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2893..3288)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Gordonia otitidis NBRC 100426 RepID=H5TT57_9ACTO id=5224278 bin=16ft_combo_ws3_JS1 species=Gordonia otitidis genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
S3-18-all-fractions_k255_716928_6
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(3295..3705)
DNA (411bp) protein (137aa)
Uncharacterized protein id=1899481 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S3-18-all-fractions_k255_716928_7
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3735..4349)
DNA (615bp) protein (205aa)
Protein co-occurring with transport systems n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PHP6_9DELT
Protein co-occurring with transport systems {ECO:0000313|EMBL:EPX63860.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
S3-18-all-fractions_k255_716928_8
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4350..5480)
DNA (1131bp) protein (377aa)
Glycosyl transferase group 1 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P0S8_GRAMM
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEU35775.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
S3-18-all-fractions_k255_716928_9
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5477..6223)
DNA (747bp) protein (249aa)
YpjG n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZDT6_9BACT
LmbE family protein
YpjG {ECO:0000313|EMBL:EAY31244.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
S3-18-all-fractions_k255_716928_10
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(6220..7548)
DNA (1329bp) protein (443aa)
UPF0747 protein DealDRAFT_1413 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GG04_9FIRM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
Displaying 10 items

View Taxonomy