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S3-18-all-fractions_k255_1036530

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_1036530_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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2..1771
DNA (1770bp) protein (590aa)
gcvP; glycine dehydrogenase, glycine cleavage system P protein (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711, ECO:0000313|EMBL:CBK40091.1};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Glycine dehydrogenase (decarboxylating) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA32_9BACT
S3-18-all-fractions_k255_1036530_2
unknown

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1775..2152
DNA (378bp) protein (126aa)

This feature has no annotations

S3-18-all-fractions_k255_1036530_3
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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2202..3026
DNA (825bp) protein (275aa)
tRNA methyl transferase-like protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X3B4_9EURY
tRNA methyl transferase-like protein
Tax=RBG_16_KB1_OP1_55_9_curated
S3-18-all-fractions_k255_1036530_4
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3023..3796
DNA (774bp) protein (258aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5C6_9BACT
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:ACK66655.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 /; RF-1)).;"
S3-18-all-fractions_k255_1036530_5

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comp(3785..4282)
DNA (498bp) protein (166aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VP24_9CYAN
Marine sediment metagenome DNA, contig: S01H1_C00409 {ECO:0000313|EMBL:GAF76878.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
S3-18-all-fractions_k255_1036530_6
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4287..4604)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8W1_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS25157.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
S3-18-all-fractions_k255_1036530_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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4802..5524
DNA (723bp) protein (241aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=uncultured prokaryote RepID=H5SKX4_9ZZZZ
outer membrane lipoprotein carrier protein LolA
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_1036530_8
Marinobacter salarius, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5532..6743
DNA (1212bp) protein (404aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=12496738 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1420917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter salarius.;"
S3-18-all-fractions_k255_1036530_9
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6775..7101
DNA (327bp) protein (109aa)
Preprotein translocase, YajC subunit n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8F9E4_DESAA
preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:ACL02890.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
S3-18-all-fractions_k255_1036530_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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7098..8657
DNA (1560bp) protein (520aa)
Preprotein translocase subunit SecD n=1 Tax=uncultured prokaryote RepID=H5SKX1_9ZZZZ
protein-export membrane protein SecD
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_1036530_11
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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8689..9900
DNA (1212bp) protein (404aa)
Preprotein translocase subunit SecF n=1 Tax=uncultured prokaryote RepID=H5SKX0_9ZZZZ
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
secF; protein-export membrane protein SecF
S3-18-all-fractions_k255_1036530_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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10091..11539
DNA (1449bp) protein (483aa)
(P)ppGpp synthetase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CGZ0_THEYO
SpoT; guanosine polyphosphate pyrophosphohydrolase/synthetase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 12 items

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