ggKbase home page

S3-18-all-fractions_k255_1886401

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_1886401_1
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

comp(3..212)
DNA (210bp) protein (70aa)
Putative septation protein SpoVG id=1969367 bin=GWD2_Deltaproteobacteria_55_8 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
septation protein SpoVG
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
S3-18-all-fractions_k255_1886401_2
unknown

Not on your lists

comp(512..1207)
DNA (696bp) protein (232aa)

This feature has no annotations

S3-18-all-fractions_k255_1886401_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1275..3281)
DNA (2007bp) protein (669aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029I4_SOLUE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
S3-18-all-fractions_k255_1886401_4
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3389..4723
DNA (1335bp) protein (445aa)
General secretory system II protein E domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WL66_GEOS8
general secretory system II protein E domain-containing protein
General secretory system II protein E domain protein {ECO:0000313|EMBL:ADW11646.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
S3-18-all-fractions_k255_1886401_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4787..5053
DNA (267bp) protein (89aa)
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta id=12556952 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histone family protein DNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S3-18-all-fractions_k255_1886401_6
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

5079..6152
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00036A5DA6
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_1886401_7
unknown

Not on your lists

6178..6372
DNA (195bp) protein (65aa)

This feature has no annotations

S3-18-all-fractions_k255_1886401_8
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(6504..6941)
DNA (438bp) protein (146aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160974}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160970};; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) RepID=D2RLC2_ACIFV
D-tyrosyl-tRNA(Tyr) deacylase
S3-18-all-fractions_k255_1886401_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7076..7540
DNA (465bp) protein (155aa)
Single-stranded DNA-binding protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SRC1_9DELT
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
S3-18-all-fractions_k255_1886401_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7640..8866
DNA (1227bp) protein (409aa)
Diguanylate cyclase id=4283030 bin=GWC2_Methylomirabilis_70_16 species=Ferrimonas balearica genus=Ferrimonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
diguanylate cyclase
Tax=GWC2_Rokubacteria_70_16_curated
S3-18-all-fractions_k255_1886401_11
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(8875..9927)
DNA (1053bp) protein (351aa)
beta-glucosidase-related glycosidase (EC:3.2.1.52)
Beta-glucosidase-related glycosidase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS2_CHLTF
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
S3-18-all-fractions_k255_1886401_12
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9924..12551)
DNA (2628bp) protein (876aa)
DNA mismatch repair protein MutS n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=MUTS_GEOSL
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
mutS-1; DNA mismatch repair protein MutS
S3-18-all-fractions_k255_1886401_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12647..13129)
DNA (483bp) protein (161aa)
Helix-turn-helix domain protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XLY9_9CHRO
helix-turn-helix domain protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S3-18-all-fractions_k255_1886401_14
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13327..14046
DNA (720bp) protein (240aa)
glycoprotease (M22) metalloprotease (EC:3.4.-.-)
Glycoprotease (M22) metalloprotease, putative {ECO:0000313|EMBL:ACI99991.1}; EC=3.4.-.- {ECO:0000313|EMBL:ACI99991.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Glycoprotease (M22) metalloprotease, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUR0_RHOCS
S3-18-all-fractions_k255_1886401_15
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14043..14495
DNA (453bp) protein (151aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WUL0_GEOS8
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ADW13232.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
S3-18-all-fractions_k255_1886401_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14749..14985
DNA (237bp) protein (79aa)
hypothetical protein id=16781325 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S3-18-all-fractions_k255_1886401_17
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15043..15693
DNA (651bp) protein (217aa)
Phosphatidylserine decarboxylase proenzyme id=3714519 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
phosphatidylserine decarboxylase
Tax=RBG_16_Deltaproteobacteria_58_17_curated
S3-18-all-fractions_k255_1886401_18
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

15690..16496
DNA (807bp) protein (269aa)
CDP-diacylglycerol/serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Pseudomonas caeni RepID=UPI0003B511F9
Uncharacterized protein {ECO:0000313|EMBL:KDA53681.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
S3-18-all-fractions_k255_1886401_19
unknown

Not on your lists

16493..17434
DNA (942bp) protein (314aa)

This feature has no annotations

S3-18-all-fractions_k255_1886401_20
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17457..17786
DNA (330bp) protein (110aa)
MbtH domain protein n=1 Tax=Fischerella sp. JSC-11 RepID=G6FNP0_9CYAN
MbtH domain-containing protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
S3-18-all-fractions_k255_1886401_21
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17798..18838)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWV7_RUBXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG04121.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
S3-18-all-fractions_k255_1886401_22
unknown

Not on your lists

19051..19137
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 22 items

View Taxonomy