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S3-18-all-fractions_k255_2152906

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_2152906_1
unknown

Not on your lists

comp(3..131)
DNA (129bp) protein (43aa)

This feature has no annotations

S3-18-all-fractions_k255_2152906_2
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

329..607
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FYP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGW37173.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein
S3-18-all-fractions_k255_2152906_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

597..1010
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000372AC98
Uncharacterized protein {ECO:0000313|EMBL:ETW96970.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
S3-18-all-fractions_k255_2152906_4
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1027..1917)
DNA (891bp) protein (297aa)
FRG domain-containing protein {ECO:0000313|EMBL:AJF05879.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
FRG domain-containing protein
FRG domain protein id=4256490 bin=GWC2_Pelobacter_58_13 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
S3-18-all-fractions_k255_2152906_5
unknown

Not on your lists

2322..3302
DNA (981bp) protein (327aa)

This feature has no annotations

S3-18-all-fractions_k255_2152906_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3756..4991
DNA (1236bp) protein (412aa)
Putative cobalt-zinc-cadmium resistance protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DDM7_MYXXD
cobalt-zinc-cadmium resistance protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S3-18-all-fractions_k255_2152906_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4988..6187
DNA (1200bp) protein (400aa)
RND family heavy metal efflux transporter MFP subunit n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1W7_CORCM
RND transporter {ECO:0000313|EMBL:KFA93936.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
czcB1; RND family heavy metal efflux transporter MFP subunit
S3-18-all-fractions_k255_2152906_8
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6197..9310
DNA (3114bp) protein (1038aa)
Heavy metal efflux pump, CzcA family n=2 Tax=Myxococcus xanthus RepID=Q1DDM9_MYXXD
Heavy metal resistance protein CzcA {ECO:0000313|EMBL:KFA93935.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
CzcA family heavy metal efflux protein
S3-18-all-fractions_k255_2152906_9
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9796..10143)
DNA (348bp) protein (116aa)
NTF2 domain-containing protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S6N5_RHIET
NTF2 domain-containing protein
NTF2 domain-containing protein {ECO:0000313|EMBL:AGS25683.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
S3-18-all-fractions_k255_2152906_10
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10371..11075)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FJ62_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX74241.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
S3-18-all-fractions_k255_2152906_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11198..12037)
DNA (840bp) protein (280aa)
Restriction endonuclease-like protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07U56_RHOP5
restriction endonuclease-like protein
Restriction endonuclease-like protein {ECO:0000313|EMBL:ABJ04528.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
S3-18-all-fractions_k255_2152906_12
Marinomonas sp. MED121, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12119..12862)
DNA (744bp) protein (248aa)
ATP-dependent RNA helicase HrpA n=1 Tax=Vibrio cholerae O1 str. NHCC-008D RepID=M7LBQ5_VIBCL
abortive infection family protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ67566.1}; TaxID=314277 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. MED121.;"
S3-18-all-fractions_k255_2152906_13
unknown

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comp(13271..13618)
DNA (348bp) protein (116aa)

This feature has no annotations

S3-18-all-fractions_k255_2152906_14
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14429..15487
DNA (1059bp) protein (353aa)
Transcriptional regulator, LacI family id=4099840 bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
S3-18-all-fractions_k255_2152906_15
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

15484..18432
DNA (2949bp) protein (983aa)
OmpA-related protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QH43_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KDA54165.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
TonB-dependent outer membrane receptor
S3-18-all-fractions_k255_2152906_16
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18738..19925
DNA (1188bp) protein (396aa)
Uncharacterized protein {ECO:0000313|EMBL:KFE71978.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein id=24457720 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Protein of unknown function DUF2329
S3-18-all-fractions_k255_2152906_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

19922..21223
DNA (1302bp) protein (434aa)
ABC transporter sugar binding protein n=23 Tax=Xanthomonas RepID=Q8PK66_XANAC id=5223542 bin=16ft_combo_ws3_JS1 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter substrate-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
S3-18-all-fractions_k255_2152906_18
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21220..22128
DNA (909bp) protein (303aa)
sugar ABC transporter permease n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E1C3FE
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDI00971.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
sugar ABC transporter permease
S3-18-all-fractions_k255_2152906_19
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22125..22964
DNA (840bp) protein (280aa)
ABC-type sugar transport system permease subunit id=4099799 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
binding-protein-dependent transporters inner membrane component
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
S3-18-all-fractions_k255_2152906_20
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22961..25912
DNA (2952bp) protein (984aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KQL5_STEMA
Putative Discoidin domain protein {ECO:0000313|EMBL:CDI02210.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
S3-18-all-fractions_k255_2152906_21
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

25942..28305
DNA (2364bp) protein (788aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54172.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Glycosyltransferase 36 id=4099819 bin=GWA2_Ignavibacteria_55_11 species=Petrotoga mobilis genus=Petrotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
glycosyl transferase family protein
S3-18-all-fractions_k255_2152906_22
unknown

Not on your lists

comp(28362..28607)
DNA (246bp) protein (82aa)

This feature has no annotations

S3-18-all-fractions_k255_2152906_23
unknown

Not on your lists

28757..28999
DNA (243bp) protein (81aa)

This feature has no annotations

S3-18-all-fractions_k255_2152906_24
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29202..30842)
DNA (1641bp) protein (547aa)
Maltose alpha-D-glucosyltransferase {ECO:0000313|EMBL:CCH52306.1}; EC=5.4.99.16 {ECO:0000313|EMBL:CCH52306.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Maltose alpha-D-glucosyltransferase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GEI1_9BACT
alpha amylase catalytic region
S3-18-all-fractions_k255_2152906_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30889..31950)
DNA (1062bp) protein (354aa)
Choloylglycine hydrolase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XV49_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC93411.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hydrolase
S3-18-all-fractions_k255_2152906_26
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31975..33321)
DNA (1347bp) protein (449aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
beta-glucosidase n=1 Tax=Dyella japonica RepID=UPI00031C0DC4
beta-glucosidase
S3-18-all-fractions_k255_2152906_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(33410..33829)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035EC753
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 27 items

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