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S3-18-all-fractions_k255_2417646

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_2417646_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..428)
DNA (426bp) protein (142aa)
Beta-lactamase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VES7_CAUST
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ADG09220.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
S3-18-all-fractions_k255_2417646_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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715..1893
DNA (1179bp) protein (393aa)
Putative RND efflux system, membrane fusion protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIU2_9BACT
efflux transporter, RND family, MFP subunit
Tax=RBG_16_Anaeromyxobacter_69_14_curated
S3-18-all-fractions_k255_2417646_3
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1890..5021
DNA (3132bp) protein (1044aa)
Putative RND efflux system, multidrug resistance protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIU1_9BACT
putative RND efflux system, multidrug resistance protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
S3-18-all-fractions_k255_2417646_4
unknown

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5041..5277
DNA (237bp) protein (79aa)
id=12556810 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
S3-18-all-fractions_k255_2417646_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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5274..6704
DNA (1431bp) protein (477aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LI94_SYNFM
RND efflux system outer membrane lipoprotein
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_2417646_6
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6725..7474
DNA (750bp) protein (250aa)
oxidoreductase n=1 Tax=Methyloferula stellata RepID=UPI000378ECB2
Uncharacterized protein {ECO:0000313|EMBL:EJL27609.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
short-chain dehydrogenase/reductase
S3-18-all-fractions_k255_2417646_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(7495..7866)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9FSE2_9CYAN id=5225898 bin=16ft_combo_ws3_JS1 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RBG_16_RIF_WS3X_71_46_curated
S3-18-all-fractions_k255_2417646_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(7881..9122)
DNA (1242bp) protein (414aa)
peptidase T (EC:3.4.11.4); K01258 tripeptide aminopeptidase [EC:3.4.11.4] id=24533235 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase T
Tax=RBG_16_RIF_WS3X_71_46_curated
S3-18-all-fractions_k255_2417646_9
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(9186..9587)
DNA (402bp) protein (134aa)
DNA polymerase beta domain protein region n=2 Tax=mine drainage metagenome RepID=T0YAU4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKB50447.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
Nucleotidyltransferase domain.
S3-18-all-fractions_k255_2417646_10
unknown

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9661..10386
DNA (726bp) protein (242aa)

This feature has no annotations

S3-18-all-fractions_k255_2417646_11
RLO_PLX_64_10, Bacteria

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10886..11746
DNA (861bp) protein (287aa)
peptidase S66 n=1 Tax=Pseudomonas fragi RepID=UPI00031EBA16
LD-carboxypeptidase family protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S3-18-all-fractions_k255_2417646_12
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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11760..12563
DNA (804bp) protein (268aa)
Cyclic nucleotide-binding protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P433_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KDA53550.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
cyclic nucleotide-binding transcriptional regulator
S3-18-all-fractions_k255_2417646_13
Mesorhizobium sp. L2C089B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12799..14079
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1X0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ05399.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
integrase family protein
Displaying 13 items

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