ggKbase home page

S3-18-all-fractions_k255_2727330

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_2727330_1
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


1..324
DNA (324bp) protein (108aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=12555580 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S10
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_2
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


338..964
DNA (627bp) protein (209aa)
50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 id=12555579 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L3P
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_3
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


967..1590
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Geobacillus sp. (strain WCH70) RepID=RL4_GEOSW
rplD; 50S ribosomal protein L4
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists


1587..1877
DNA (291bp) protein (97aa)
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 id=12555577 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplW; 50S ribosomal protein L23
Tax=RBG_16_Acidobacteria_70_10_curated
S3-18-all-fractions_k255_2727330_5
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


1881..2708
DNA (828bp) protein (276aa)
50S ribosomal protein L2 n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003735D53
rplB; 50S ribosomal protein L2
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_6
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


2719..3006
DNA (288bp) protein (96aa)
30S ribosomal protein S19 n=1 Tax=Bacteria RepID=UPI000364FF37
30S ribosomal protein S19
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_7
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


3038..3388
DNA (351bp) protein (117aa)
50S ribosomal protein L22 n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NPK3_9DELT
50S ribosomal protein L22
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_8
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


3404..4054
DNA (651bp) protein (217aa)
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=12555573 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S3
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_9
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists


4087..4506
DNA (420bp) protein (140aa)
50S ribosomal protein L16 n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS53_KYRT2
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
50S ribosomal protein L16
S3-18-all-fractions_k255_2727330_10
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


4511..4702
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=RL29_PELCD
rpmC; 50S ribosomal protein L29
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_11
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


4715..4999
DNA (285bp) protein (95aa)
30S ribosomal protein S17 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2L4_SPHTD
30S ribosomal protein S17
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_12
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


5015..5383
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=12555569 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplN; 50S ribosomal protein L14
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_13
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


5393..5716
DNA (324bp) protein (108aa)
50S ribosomal protein L24 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL24_CARHZ
rplX; 50S ribosomal protein L24
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_14
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


5738..6379
DNA (642bp) protein (214aa)
50S ribosomal protein L5 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISB0_KORVE
rplE; 50S ribosomal protein L5
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_15
RBG_16_OP11_Woesebacteria_39_8b_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists


6389..6574
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=uncultured bacterium RepID=K2F6I0_9BACT
30S ribosomal protein S14
Tax=RBG_16_OP11_Woesebacteria_39_8b_curated
S3-18-all-fractions_k255_2727330_16
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


6606..7004
DNA (399bp) protein (133aa)
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 id=4399918 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_17
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7016..7555
DNA (540bp) protein (180aa)
50S ribosomal protein L6 n=1 Tax=Kocuria rhizophila RepID=UPI0003039759
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=72000 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila.;"
rplF; 50S ribosomal protein L6
S3-18-all-fractions_k255_2727330_18
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists


7568..7957
DNA (390bp) protein (130aa)
50S ribosomal protein L18 n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=RL18_DICT6
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12).;"
S3-18-all-fractions_k255_2727330_19
bacterium UASB270, Bacteria

Not on your lists


7977..8606
DNA (630bp) protein (210aa)
30S ribosomal protein S5 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXY8_DESAC
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
30S ribosomal protein S5
S3-18-all-fractions_k255_2727330_20
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


8627..8821
DNA (195bp) protein (65aa)
50S ribosomal protein L30 n=1 Tax=Candidatus Ishikawaella capsulata Mpkobe RepID=C5WCS3_9ENTR
50S ribosomal protein L30
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_21
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


8824..9264
DNA (441bp) protein (147aa)
50S ribosomal protein L15 id=4034824 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
rplO; 50S ribosomal protein L15
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_22
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists


9267..10655
DNA (1389bp) protein (463aa)
protein translocase subunit SecY/sec61 alpha; K03076 preprotein translocase subunit SecY id=16945878 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
protein translocase subunit secY/sec61 alpha
Tax=RBG_16_Acidobacteria_64_8_curated
S3-18-all-fractions_k255_2727330_23
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

10675..11064
DNA (390bp) protein (130aa)
Adenylate kinase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=KAD_KOSOT
adenylate kinase
Tax=RBG_16_Acidobacteria_64_8_curated
Displaying 23 items

View Taxonomy