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S3-18-all-fractions_k255_2901642

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_2901642_1
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

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comp(2..5152)
DNA (5151bp) protein (1717aa)
endoglucanase-like protein (EC:3.2.1.-)
CHU large protein; endoglucanase-related protein, glucosyl hydrolase family 9 protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11VF9_CYTH3
Uncharacterized protein {ECO:0000313|EMBL:AKC83015.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
S3-18-all-fractions_k255_2901642_2
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(5492..6574)
DNA (1083bp) protein (361aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8E916_9BACL
ribosome-associated GTPase
S3-18-all-fractions_k255_2901642_3
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6683..7612
DNA (930bp) protein (310aa)
6-phosphofructokinase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BGW0_MEISD
6-phosphofructokinase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
S3-18-all-fractions_k255_2901642_4
unknown

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comp(7753..8424)
DNA (672bp) protein (224aa)

This feature has no annotations

S3-18-all-fractions_k255_2901642_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8529..8750
DNA (222bp) protein (74aa)
Heavy metal-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABR9_GEMAT
Heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:AHG91218.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_2901642_6
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8747..9127
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFA2_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO02191.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
S3-18-all-fractions_k255_2901642_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9149..11548
DNA (2400bp) protein (800aa)
cation-transporting P-type ATPase (EC:3.6.3.4)
Cation-transporting P-type ATPase {ECO:0000313|EMBL:BAH39945.1}; EC=3.6.3.4 {ECO:0000313|EMBL:BAH39945.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Cation-transporting P-type ATPase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABR8_GEMAT
S3-18-all-fractions_k255_2901642_8
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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11565..12038
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=2848037 bin=GWF2_Syntrophobacterales_56_9 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Spirochaete_67_19_curated
S3-18-all-fractions_k255_2901642_9
unknown

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12022..12192
DNA (171bp) protein (57aa)

This feature has no annotations

S3-18-all-fractions_k255_2901642_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12207..12578
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036BEB84
protein of unknown function DUF156
Uncharacterized protein {ECO:0000313|EMBL:AHG89479.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_2901642_11
unknown

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12767..13096
DNA (330bp) protein (110aa)
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBA5E6
S3-18-all-fractions_k255_2901642_12
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13236..15635)
DNA (2400bp) protein (800aa)
Aldehyde Dehydrogenase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CU76_TRURR
Aldehyde dehydrogenase {ECO:0000313|EMBL:AKF06395.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
aldehyde dehydrogenase
S3-18-all-fractions_k255_2901642_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(15651..16658)
DNA (1008bp) protein (336aa)
Deoxyribose-phosphate aldolase n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2GNV8_9RHOB
deoxyribose-phosphate aldolase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_2901642_14
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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comp(16680..18902)
DNA (2223bp) protein (741aa)
SpoIID/LytB domain-containing protein
SpoIID/LytB domain-containing protein; K06381 stage II sporulation protein D id=24425453 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
S3-18-all-fractions_k255_2901642_15
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(18960..19802)
DNA (843bp) protein (281aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53501.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
DNA replication protein DnaC id=8266550 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
dnaI; primosomal protein dnaI
S3-18-all-fractions_k255_2901642_16
RLO_RIF03_38_15, RIF3, Bacteria

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19861..21273
DNA (1413bp) protein (471aa)
sulfatase id=16867197 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
sulfatase
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
S3-18-all-fractions_k255_2901642_17
Piscirickettsia salmonis, Piscirickettsia, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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21609..21764
DNA (156bp) protein (52aa)
Ribosomal protein L33 n=1 Tax=Piscirickettsia salmonis LF-89 = ATCC VR-1361 RepID=U4TJH1_PISSA
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1238 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Piscirickettsia.;" source="Piscirickettsia salmonis.;"
rpmG; 50S ribosomal protein L33
S3-18-all-fractions_k255_2901642_18
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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21931..22539
DNA (609bp) protein (203aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
manganese/iron superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Paenibacillus lactis 154 RepID=G4HPK9_9BACL
S3-18-all-fractions_k255_2901642_19
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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22828..23154
DNA (327bp) protein (109aa)
Transcriptional regulator n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IFF8_ALIAT
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEJ42860.1}; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus; acidocaldarius).;"
S3-18-all-fractions_k255_2901642_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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23368..24723
DNA (1356bp) protein (452aa)
tRNA(Ile)-lysidine synthetase; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] id=14626373 bin=bin7_NC10_sister species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
tRNA(Ile)-lysidine synthetase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S3-18-all-fractions_k255_2901642_21
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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24720..25277
DNA (558bp) protein (186aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KT77_ARCVS
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KEO83399.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
S3-18-all-fractions_k255_2901642_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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25387..26247
DNA (861bp) protein (287aa)
ftsH; ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=uncultured Acidobacteriales bacterium HF0200_23L05 RepID=E0XUI3_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 22 items

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