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S3-18-all-fractions_k255_3713128

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_3713128_1
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..785
DNA (783bp) protein (261aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1T2_DESAT
RNA modification enzyme, MiaB family
S3-18-all-fractions_k255_3713128_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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817..1317
DNA (501bp) protein (167aa)
hypothetical protein id=14430954 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S3-18-all-fractions_k255_3713128_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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1460..2218
DNA (759bp) protein (253aa)
chromosome partitioning ATPase; K03496 chromosome partitioning protein id=12554081 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chromosome partitioning ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S3-18-all-fractions_k255_3713128_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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2211..3086
DNA (876bp) protein (292aa)
ParB-like partition protein id=12554082 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ParB-like partition protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S3-18-all-fractions_k255_3713128_5
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3198..3635)
DNA (438bp) protein (146aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UX08_TERSS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV81895.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
S3-18-all-fractions_k255_3713128_6
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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3639..6059
DNA (2421bp) protein (807aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53940.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein id=8266103 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
YjgP/YjgQ family permease
S3-18-all-fractions_k255_3713128_7
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6069..7316)
DNA (1248bp) protein (416aa)
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
Probable NADH dehydrogenase id=3923253 bin=GWC2_Ignavibacteria_56_12 species=Acanthamoeba castellanii genus=Acanthamoeba taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
S3-18-all-fractions_k255_3713128_8
unknown

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comp(7341..8648)
DNA (1308bp) protein (436aa)

This feature has no annotations

S3-18-all-fractions_k255_3713128_9
unknown

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comp(8693..9901)
DNA (1209bp) protein (403aa)

This feature has no annotations

S3-18-all-fractions_k255_3713128_10
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9898..10434)
DNA (537bp) protein (179aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SWZ6_CAUSK
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABZ73204.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
S3-18-all-fractions_k255_3713128_11
unknown

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comp(10560..10775)
DNA (216bp) protein (72aa)

This feature has no annotations

S3-18-all-fractions_k255_3713128_12
unknown

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comp(10885..11406)
DNA (522bp) protein (174aa)
ECF subfamily protein RNA polymerase sigma-24 subunit n=1 Tax=Serinicoccus profundi RepID=UPI000255EAE2
S3-18-all-fractions_k255_3713128_13
unknown

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comp(11560..12117)
DNA (558bp) protein (186aa)

This feature has no annotations

S3-18-all-fractions_k255_3713128_14
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12363..12632)
DNA (270bp) protein (90aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
S-adenosylmethionine synthase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z0B1_DESAT
Displaying 14 items

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