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S3-18-all-fractions_k255_3916921

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_3916921_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..362)
DNA (360bp) protein (120aa)
hypothetical protein
hypothetical protein id=24658139 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:ABC43947.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM 13855 / M31).;"
S3-18-all-fractions_k255_3916921_2
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1005..2090)
DNA (1086bp) protein (362aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U6L9_CYAP2
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADN14778.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
S3-18-all-fractions_k255_3916921_3
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2132..2620)
DNA (489bp) protein (163aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S056_9DELT
ybaK/ebsC protein
S3-18-all-fractions_k255_3916921_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2644..3252)
DNA (609bp) protein (203aa)
hypothetical protein id=12554825 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
S3-18-all-fractions_k255_3916921_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3312..3794)
DNA (483bp) protein (161aa)
MarR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J1_GEMAT
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:BAH37501.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_3916921_6
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3833..5659
DNA (1827bp) protein (609aa)
Cell division protein FtsK n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QR59_9DELT
Cell division protein FtsK {ECO:0000313|EMBL:EPX59093.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
S3-18-all-fractions_k255_3916921_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5663..5917
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BX57_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ35950.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
S3-18-all-fractions_k255_3916921_8
Clostridium sp. CAG:768, Melainabacteria, Bacteria

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comp(5992..6345)
DNA (354bp) protein (118aa)
Tail protein n=1 Tax=Clostridium sp. CAG:768 RepID=R7HYK0_9CLOT
Tail protein {ECO:0000313|EMBL:CDE43297.1}; TaxID=1262838 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
S3-18-all-fractions_k255_3916921_9
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6333..7100)
DNA (768bp) protein (256aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF04029.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
Putative LmbE-like protein id=4841688 bin=GWC2_Deltaproteobacteria_55_46 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
LmbE-like protein
S3-18-all-fractions_k255_3916921_10
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7100..7990)
DNA (891bp) protein (297aa)
Beta-xylosidase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6T7_SORCE
Beta-xylosidase {ECO:0000313|EMBL:EYF03208.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
beta-xylosidase
S3-18-all-fractions_k255_3916921_11
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7962..8765)
DNA (804bp) protein (268aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase, putative {ECO:0000313|EMBL:ACI98202.1}; EC=2.7.7.24 {ECO:0000313|EMBL:ACI98202.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Glucose-1-phosphate thymidylyltransferase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRW6_RHOCS
S3-18-all-fractions_k255_3916921_12
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8762..9904)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRW5_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI98201.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
S3-18-all-fractions_k255_3916921_13
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

10049..10705
DNA (657bp) protein (219aa)
Tax=RBG_13_OP8X_37_8_curated
S3-18-all-fractions_k255_3916921_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10687..11985)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI000395BA15
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16300.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
S3-18-all-fractions_k255_3916921_15
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12123..12710
DNA (588bp) protein (196aa)
Kazal domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBY3_9DELT
Kazal domain protein {ECO:0000313|EMBL:EDM76656.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
S3-18-all-fractions_k255_3916921_16
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(12711..13835)
DNA (1125bp) protein (375aa)
beta-lactamase n=1 Tax=Schlesneria paludicola RepID=UPI000299F097
putative esterase
Tax=BJP_IG2102_BRC1_58_13
S3-18-all-fractions_k255_3916921_17
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13857..14414)
DNA (558bp) protein (186aa)
Putative outer membrane protein id=2189842 bin=GWB2_Geobacter-like_52_12 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
outer membrane protein
Tax=GWB2_Geobacteraceae_52_12_curated
S3-18-all-fractions_k255_3916921_18
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14519..15298)
DNA (780bp) protein (260aa)
fabG8; protein FabG8 (EC:1.1.1.100)
FabG8 {ECO:0000313|EMBL:ACN17048.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ACN17048.1};; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
FabG8 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QC31_DESAH
S3-18-all-fractions_k255_3916921_19
Burkholderia sp. USM B20, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15295..16569)
DNA (1275bp) protein (425aa)
Monooxygenase, flavin-binding family n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BEH5_9BURK
Monooxygenase {ECO:0000313|EMBL:KJE54631.1}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. USM B20.;"
pyridine nucleotide-disulfide oxidoreductase family protein
S3-18-all-fractions_k255_3916921_20
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16631..17755
DNA (1125bp) protein (375aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein id=2736299 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:KFL37376.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
metB; cystathionine gamma-synthase
S3-18-all-fractions_k255_3916921_21
unknown

Not on your lists

17818..18120
DNA (303bp) protein (101aa)

This feature has no annotations

S3-18-all-fractions_k255_3916921_22
unknown

Not on your lists

comp(18199..19629)
DNA (1431bp) protein (477aa)

This feature has no annotations

S3-18-all-fractions_k255_3916921_23
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(19763..20872)
DNA (1110bp) protein (370aa)
chorismate mutase (EC:1.3.1.12)
Chorismate mutase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRS3_HALO1
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_3916921_24
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21279..22640
DNA (1362bp) protein (454aa)
Di-/tripeptide transporter n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NZ63_9DELT
Amino acid transporter {ECO:0000313|EMBL:KFA89660.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
amino acid/peptide transporter
Displaying 24 items

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