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S3-18-all-fractions_k255_4386742

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_4386742_1
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..2712)
DNA (2712bp) protein (904aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VY3_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE64941.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
S3-18-all-fractions_k255_4386742_2
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2954..3187
DNA (234bp) protein (78aa)
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
S3-18-all-fractions_k255_4386742_3
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3184..3585
DNA (402bp) protein (134aa)
Ribonuclease VapC n=1 Tax=Thermus oshimai JL-2 RepID=K7RJU0_THEOS
putative nucleic acid-binding protein, contains PIN domain
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
S3-18-all-fractions_k255_4386742_4

Not on your lists

3690..4772
DNA (1083bp) protein (361aa)
alanine--glyoxylate transaminase (EC:2.6.1.44)
Aminotransferase class V n=1 Tax=uncultured prokaryote RepID=H5SIQ3_9ZZZZ
Aminotransferase class V {ECO:0000313|EMBL:BAL56039.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
S3-18-all-fractions_k255_4386742_5

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4788..6386
DNA (1599bp) protein (533aa)
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMQ1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL83497.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S3-18-all-fractions_k255_4386742_6
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6489..7559
DNA (1071bp) protein (357aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIG9_CHLTF
Tax=RBG_16_Deltaproteobacteria_71_12_curated
S3-18-all-fractions_k255_4386742_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(7563..8051)
DNA (489bp) protein (163aa)
Rare lipoprotein A n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y7D0_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41037.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
S3-18-all-fractions_k255_4386742_8
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(8123..8779)
DNA (657bp) protein (219aa)
hypothetical protein id=14429396 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
conserved protein of unknown function
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
S3-18-all-fractions_k255_4386742_9
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(8987..10486)
DNA (1500bp) protein (500aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
purB; adenylosuccinate lyase PurB (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8DV48_THETY
S3-18-all-fractions_k255_4386742_10
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

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10501..11772
DNA (1272bp) protein (424aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=592015 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniformans ATCC BAA-1850.;"
Arginine deiminase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFB1_RHOM4
Arginine deiminase
S3-18-all-fractions_k255_4386742_11
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

11793..12731
DNA (939bp) protein (313aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase, catabolic n=7 Tax=Clostridium thermocellum RepID=A3DGL1_CLOTH
S3-18-all-fractions_k255_4386742_12
unknown

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comp(13011..13721)
DNA (711bp) protein (237aa)

This feature has no annotations

S3-18-all-fractions_k255_4386742_13
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13815..14018)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FMR2_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KEO84819.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
hypothetical protein
S3-18-all-fractions_k255_4386742_14
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists


comp(14028..14591)
DNA (564bp) protein (188aa)
Ham1-like protein n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JAE0_FRASC
Uncharacterized protein {ECO:0000313|EMBL:KDA53285.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Ham1-like protein
S3-18-all-fractions_k255_4386742_15
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14588..15196)
DNA (609bp) protein (203aa)
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Dephospho-CoA kinase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9K2_GEOOG
S3-18-all-fractions_k255_4386742_16
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15193..16167)
DNA (975bp) protein (325aa)
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
5,10-methylene-tetrahydrofolate dehydrogenase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B607C2
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
S3-18-all-fractions_k255_4386742_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16164..16880)
DNA (717bp) protein (239aa)
ubiE; menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Demethylmenaquinone methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB77_GEMAT
S3-18-all-fractions_k255_4386742_18
unknown

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comp(16963..17133)
DNA (171bp) protein (57aa)

This feature has no annotations

S3-18-all-fractions_k255_4386742_19
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

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17438..17890
DNA (453bp) protein (151aa)
50S ribosomal protein L13 n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=RL13_DICTD
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
S3-18-all-fractions_k255_4386742_20
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists


17904..18299
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGN9_CHLTF
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
30S ribosomal protein S9
S3-18-all-fractions_k255_4386742_21
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists


18312..19085
DNA (774bp) protein (258aa)
30S ribosomal protein S2 n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000370151D
rpsB; 30S ribosomal protein S2
Tax=RBG_13_Acidobacteria_68_16_curated
S3-18-all-fractions_k255_4386742_22
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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19242..19895
DNA (654bp) protein (218aa)
Elongation factor Ts n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KNR8_9FIRM
translation elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
S3-18-all-fractions_k255_4386742_23
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

19892..20626
DNA (735bp) protein (245aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase id=2237613 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
S3-18-all-fractions_k255_4386742_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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20643..21047
DNA (405bp) protein (135aa)
Ribosome-recycling factor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AL4_SOLUE
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 24 items

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