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S3-18-all-fractions_k255_4739391

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_4739391_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

54..1031
DNA (978bp) protein (326aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C51_SOLUE
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S3-18-all-fractions_k255_4739391_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1065..2633
DNA (1569bp) protein (523aa)
2-oxoglutarate dehydrogenase E2 component {ECO:0000313|EMBL:CDM66810.1}; EC=2.3.1.61 {ECO:0000313|EMBL:CDM66810.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sucB; dihydrolipoamide succinyltransferase, component of 2-oxoglutarate dehydrogenase complex (E2) (EC:2.3.1.61)
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y968_THEBD
S3-18-all-fractions_k255_4739391_3
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2744..3301
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UW79_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55255.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
S3-18-all-fractions_k255_4739391_4
Caldithrix abyssi, Caldithrix, Bacteria

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comp(3305..4765)
DNA (1461bp) protein (487aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
Glycogen synthase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XYB5_9BACT
glgA; glycogen synthase
S3-18-all-fractions_k255_4739391_5
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(4768..6027)
DNA (1260bp) protein (420aa)
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] id=16802497 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Tax=RBG_16_Actinobacteria_70_17_curated
S3-18-all-fractions_k255_4739391_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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6075..6788
DNA (714bp) protein (238aa)
Octanoyltransferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U817_MYXSD
lipoate-protein ligase B
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S3-18-all-fractions_k255_4739391_7
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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6785..7789
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUE8_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:ETW93353.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
S3-18-all-fractions_k255_4739391_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7947..8972
DNA (1026bp) protein (342aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
quinolinate synthetase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B75EEB
nadA; quinolinate synthase, A subunit
S3-18-all-fractions_k255_4739391_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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8969..10651
DNA (1683bp) protein (561aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Quinolinate synthase, B subunit (L-aspartate oxidase) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZH25_AZOL4
nadB; quinolinate synthase, B subunit (L-aspartate oxidase)
S3-18-all-fractions_k255_4739391_10
bacterium YEK0313, Bacteria

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10648..11526
DNA (879bp) protein (293aa)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YIF0_9RHIZ
Putative nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000313|EMBL:CEJ12194.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
nadC; nicotinate-nucleotide pyrophosphorylase
S3-18-all-fractions_k255_4739391_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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11537..12463
DNA (927bp) protein (309aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
lipoic acid synthetase (EC:2.8.1.8)
Lipoyl synthase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SHH9_THEM7
S3-18-all-fractions_k255_4739391_12
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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12671..13546
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LPH1_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL17145.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
S3-18-all-fractions_k255_4739391_13

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comp(13509..14450)
DNA (942bp) protein (314aa)
Putative permease n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR4_9BACT
Putative permease {ECO:0000313|EMBL:AAY89248.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
S3-18-all-fractions_k255_4739391_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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14514..14963
DNA (450bp) protein (150aa)
bamK; GCN5-related N-acetyltransferase BamK id=24577278 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
S3-18-all-fractions_k255_4739391_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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15018..16334
DNA (1317bp) protein (439aa)
Uncharacterized conserved protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SJ73_HAHCH id=5224937 bin=16ft_combo_ws3_JS1 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
S3-18-all-fractions_k255_4739391_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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16391..17290
DNA (900bp) protein (300aa)
L-proline dehydrogenase (EC:1.5.99.8)
L-proline dehydrogenase {ECO:0000313|EMBL:ABG05833.1}; EC=1.5.99.8 {ECO:0000313|EMBL:ABG05833.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
L-proline dehydrogenase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARZ5_RUBXD
S3-18-all-fractions_k255_4739391_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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17381..18370
DNA (990bp) protein (330aa)
GGDEF domain protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEV4_SORC5
diguanylate cyclase
GGDEF domain protein {ECO:0000313|EMBL:CAN93061.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
S3-18-all-fractions_k255_4739391_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(18396..20411)
DNA (2016bp) protein (672aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=2 Tax=Singulisphaera acidiphila RepID=L0DQA9_SINAD
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:AGA31073.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
S3-18-all-fractions_k255_4739391_19
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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20440..20823
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GVK1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90767.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
S3-18-all-fractions_k255_4739391_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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20868..22607
DNA (1740bp) protein (580aa)
DNA repair and genetic recombination protein id=2598282 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA repair protein RecN
Tax=GWA2_Rokubacteria_73_35_curated
S3-18-all-fractions_k255_4739391_21
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

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22604..23341
DNA (738bp) protein (246aa)
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein id=17134015 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
translation factor
Tax=RBG_13_Aminicenantes_64_14_curated
S3-18-all-fractions_k255_4739391_22
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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23338..25233
DNA (1896bp) protein (632aa)
hypothetical protein id=24396402 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
S3-18-all-fractions_k255_4739391_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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25264..27513
DNA (2250bp) protein (750aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CD9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81277.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
S3-18-all-fractions_k255_4739391_24
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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27510..28013
DNA (504bp) protein (168aa)
coaD; Phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase id=2537548 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_16_Acidobacteria_70_10_curated
S3-18-all-fractions_k255_4739391_25
Oceaniovalibus guishaninsula, Oceaniovalibus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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28010..29038
DNA (1029bp) protein (343aa)
Adenosine deaminase n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2GK25_9RHOB
Adenosine deaminase {ECO:0000313|EMBL:EKE43101.1}; TaxID=1231392 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceaniovalibus.;" source="Oceaniovalibus guishaninsula JLT2003.;"
adenosine deaminase
S3-18-all-fractions_k255_4739391_26
unknown

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29100..29360
DNA (261bp) protein (87aa)

This feature has no annotations

S3-18-all-fractions_k255_4739391_27
unknown

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29543..30145
DNA (603bp) protein (201aa)

This feature has no annotations

S3-18-all-fractions_k255_4739391_28
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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30142..31551
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S7V8_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY66273.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
S3-18-all-fractions_k255_4739391_29
unknown

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comp(31505..31888)
DNA (384bp) protein (128aa)

This feature has no annotations

S3-18-all-fractions_k255_4739391_30
RLO_PLX_64_10, Bacteria

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32005..34704
DNA (2700bp) protein (900aa)
Pyruvate dehydrogenase E1 component n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z4N1_MELRP
pyruvate dehydrogenase E1 component
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Displaying items 1-30 of 33 in total

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