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S3-18-all-fractions_k255_5162342

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_5162342_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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441..1607
DNA (1167bp) protein (389aa)
malate--CoA ligase subunit beta id=8266613 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
sucC; succinyl-CoA synthetase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S3-18-all-fractions_k255_5162342_2
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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1611..2501
DNA (891bp) protein (297aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
succinyl-CoA ligase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SDE1_9BACT
S3-18-all-fractions_k255_5162342_3
unknown

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2695..3372
DNA (678bp) protein (226aa)

This feature has no annotations

S3-18-all-fractions_k255_5162342_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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3476..3898
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021N8_SOLUE
S3-18-all-fractions_k255_5162342_5
unknown

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3913..4221
DNA (309bp) protein (103aa)

This feature has no annotations

S3-18-all-fractions_k255_5162342_6
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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4367..5977
DNA (1611bp) protein (537aa)
Metal dependent phosphohydrolase n=1 Tax=Thermincola potens (strain JR) RepID=D5XBB9_THEPJ
metal dependent phosphohydrolase
Tax=RBG_13_OP8X_37_8_curated
S3-18-all-fractions_k255_5162342_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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6075..6632
DNA (558bp) protein (186aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWV1_OPITP
uracil-DNA glycosylase superfamily protein
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ACB74230.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
S3-18-all-fractions_k255_5162342_8
unknown

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6629..6883
DNA (255bp) protein (85aa)

This feature has no annotations

S3-18-all-fractions_k255_5162342_9
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6886..8433)
DNA (1548bp) protein (516aa)
ABC-type glycine betaine transport, periplasmic subunit
Uncharacterized protein {ECO:0000313|EMBL:AKH37723.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
ABC transporter amino acid permease; K05846 osmoprotectant transport system permease protein id=14430831 bin=bin3_NC10 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
S3-18-all-fractions_k255_5162342_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(8430..9158)
DNA (729bp) protein (243aa)
Glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) (EC:3.6.3.-)
Putative Glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:CBE69052.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBE69052.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative Glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH21_9BACT
S3-18-all-fractions_k255_5162342_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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9217..10437
DNA (1221bp) protein (407aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BG79_OLICM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S3-18-all-fractions_k255_5162342_12
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10984..12288
DNA (1305bp) protein (435aa)
Nucleic acid-independent polyadenylating polymerase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q39ZX1_PELCD
pcnB; nucleic acid-independent polyadenylating polymerase
Nucleic acid-independent polyadenylating polymerase {ECO:0000313|EMBL:ABA90336.2}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
S3-18-all-fractions_k255_5162342_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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12356..13033
DNA (678bp) protein (226aa)
Succinate dehydrogenase cytochrome b subunit n=1 Tax=uncultured bacterium A1Q1_fos_515 RepID=L7VQV0_9BACT
succinate dehydrogenase (or fumarate reductase) cytochrome subunit B, b558 family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S3-18-all-fractions_k255_5162342_14
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

13044..14984
DNA (1941bp) protein (647aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:ACL24479.1}; EC=1.3.99.1 {ECO:0000313|EMBL:ACL24479.1};; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G9W4_CHLAD
S3-18-all-fractions_k255_5162342_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

14984..15754
DNA (771bp) protein (257aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit (EC:1.3.5.1)
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:ABJ88312.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABJ88312.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Succinate dehydrogenase subunit B n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PV8_SOLUE
S3-18-all-fractions_k255_5162342_16
unknown

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16042..16227
DNA (186bp) protein (62aa)

This feature has no annotations

S3-18-all-fractions_k255_5162342_17
unknown

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16339..16482
DNA (144bp) protein (48aa)

This feature has no annotations

S3-18-all-fractions_k255_5162342_18
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16804..18345)
DNA (1542bp) protein (514aa)
mercuric reductase
Mercuric reductase {ECO:0000313|EMBL:AJE03650.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Pyridine nucleotide-disulphide oxidoreductase dimerisation region id=1973664 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
S3-18-all-fractions_k255_5162342_19
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

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comp(18338..19078)
DNA (741bp) protein (247aa)
TVP38/TMEM64 family membrane protein slr0305 n=1 Tax=Chlorogloeopsis RepID=UPI000305D27E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY47955.1}; Flags: Precursor;; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
Displaying 19 items

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