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S3-18-all-fractions_k255_1812647_6

Organism: S3-18-all-fractions_conc_56

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 6317..7777

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor id=12554063 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 491.0
  • Bit_score: 450
  • Evalue 1.70e-123
RNA polymerase sigma54 factor similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 493.0
  • Bit_score: 425
  • Evalue 1.70e-116
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 488.0
  • Bit_score: 476
  • Evalue 3.20e-131

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Taxonomy

R_Acidobacteria_68_18 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
ATGGCGTTAGAGCAAAAACTATCCCTGAAACTGGCTCAGAAGCTGGTGATGACGCCTTCTCTCCAGCAGGCGATCAAGCTTCTGCAGATGACTCGCATGGAGCTCGATACGCTGCTGACGCAAGAGCTGGTCGAGAACCCGGTGCTCGAGGAGAGCTCGGAAAACAACGAGGAGGAGGCCCCTCCCCGCGAAGAGCTTGCGGAGGAGCGGCCCGAGCCGACCAACGGCGAAGAGCTCAATCACACCGAGTCGATGGAGAACATCGATCTCGATGCCTACTTCGGCGACTACTGGGAGGGGACCGGCCATACCTCGATGATGGAGGAGCGCGACGAGCCTCCGATCGAGAACAGCCTTTCCCGCGAGCCGGACCTCTACGACCACCTCCTGTGGCAGCTTCACATGGCGGAGCTCCCACCGCGGCAGCGGGAGATCGGCGAGCTGATCATCGGCAACCTGGATCCGGACGGCTACCTGGTCGCCACCGCGGAGGAGATCCGCGCCATGGGCGACGCGGAGGGGTTCGACTACACGCTCGAAGAGGTCGAAGAGGCCCTGTGCATGATCCGGAACTTCGATCCGCCGGGCATCGCGTGCAAGGACCTCCCGGAGAGCCTGCTCTGGCAGATGGACATGCGCGAGGTGCCGCAGGACGACCTGGCCCGCCGCATGGTGATCGAGGCCTGGGACCTCTTCCTGCGCCGCCAGTTCCCCGCGGTGGCCAAGAAGCTGGGCGTCGAGCTGGCGGAGCTCGAAGAGGCGGTCGAGCTGGTGCGCAGCCTGGAGATCCATCCGGGCCGCAAGTTCAGCACCGACCGTCCCCACTACATCGAGCCGGACGTGTTCGTCCGCCGCGTCGGCGACGAGTACGTCATCCAGTTGAATGACGACGGCCTGCCGCGCCTGCGGGTGAGCCGCGCCTACCGCCGGATGCTGCAGAGCATGCGCAGCGAGGGCCGCCAGTCGGAAGCGCAGACGTTCATCAAGGACAAGATCCGCTCCGCGGTCTGGCTGATCAAGAGCCTGGATCAGCGTCAGCGCACGATCTACAAGGTGGCGTCGTCGATCGTCCGCCAGCAGCGCGAGTTCCTCGACCAGGGGATCGAGCACCTGCGCCCGATGGTCCTGCGCGACGTGGCCGAAGACATCGGGATGCACGAGTCCACCGTCAGCCGCGTGGTGTCGAACAAGTACATCCATACCCACCGCGGCCTGTTCCCGATGAAGTTTTTCTTCCACAGCGGCATCGACCGTGAGTACGGAGAGAACATTTCGTCGCTGACGGTCAAGCGCAAGATCGAGCAGCTCATCCAGGCGGAAGATCCCAAGCGGCCGCTGTCTGACAGCGAGCTGATGCGCATCTTGAACCGCGAGGGGATCCAGATCGCACGCCGGACCGTCGCCAAGTACCGCGACGAGCTGAGCATTCCCTCTTCGACGGATCGCAAACAGATCTTCTGA
PROTEIN sequence
Length: 487
MALEQKLSLKLAQKLVMTPSLQQAIKLLQMTRMELDTLLTQELVENPVLEESSENNEEEAPPREELAEERPEPTNGEELNHTESMENIDLDAYFGDYWEGTGHTSMMEERDEPPIENSLSREPDLYDHLLWQLHMAELPPRQREIGELIIGNLDPDGYLVATAEEIRAMGDAEGFDYTLEEVEEALCMIRNFDPPGIACKDLPESLLWQMDMREVPQDDLARRMVIEAWDLFLRRQFPAVAKKLGVELAELEEAVELVRSLEIHPGRKFSTDRPHYIEPDVFVRRVGDEYVIQLNDDGLPRLRVSRAYRRMLQSMRSEGRQSEAQTFIKDKIRSAVWLIKSLDQRQRTIYKVASSIVRQQREFLDQGIEHLRPMVLRDVAEDIGMHESTVSRVVSNKYIHTHRGLFPMKFFFHSGIDREYGENISSLTVKRKIEQLIQAEDPKRPLSDSELMRILNREGIQIARRTVAKYRDELSIPSSTDRKQIF*