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S3-18-all-fractions_k255_1812647

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_1812647_1
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

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3..356
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000348A2F7
WD repeat protein
WD40 repeat-containing protein {ECO:0000313|EMBL:AFY46847.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
S3-18-all-fractions_k255_1812647_2
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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754..1737
DNA (984bp) protein (328aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E7C0_GEOLS
acetyl-CoA carboxylase carboxyltransferase subunit alpha
S3-18-all-fractions_k255_1812647_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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1745..3415
DNA (1671bp) protein (557aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=12554060 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
recJ; single-stranded DNA-specific exonuclease RecJ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
S3-18-all-fractions_k255_1812647_4
unknown

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3447..5540
DNA (2094bp) protein (698aa)

This feature has no annotations

S3-18-all-fractions_k255_1812647_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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5537..6304
DNA (768bp) protein (256aa)
ABC transporter, ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR38_KORVE
ABC transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
S3-18-all-fractions_k255_1812647_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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6317..7777
DNA (1461bp) protein (487aa)
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor id=12554063 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA polymerase sigma54 factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S3-18-all-fractions_k255_1812647_7
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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7794..8246
DNA (453bp) protein (151aa)
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
Phosphotransferase system protein IIA id=2455837 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
S3-18-all-fractions_k255_1812647_8
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8248..9237
DNA (990bp) protein (330aa)
HPr kinase/phosphorylase n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AJW9_GEOSK
hprK; HPr(Ser) kinase/phosphatase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
S3-18-all-fractions_k255_1812647_9
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

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9250..10116
DNA (867bp) protein (289aa)
UPF0042 nucleotide-binding protein AciPR4_1305 id=2084968 bin=GWD2_Nitrospirae-related_57_8 species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
putative P-loop-containing kinase
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
S3-18-all-fractions_k255_1812647_10
RBG_16_NC10_65_8_curated, NC10, Bacteria

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10189..10635
DNA (447bp) protein (149aa)
Pts system fructose IIA component id=3930209 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
phosphotransferase system, fructose subfamily IIA component
Tax=RBG_16_NC10_65_8_curated
S3-18-all-fractions_k255_1812647_11
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10632..10901
DNA (270bp) protein (90aa)
PTS system HPr enzyme n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z3G0_XANCT
PTS system HPr enzyme {ECO:0000313|EMBL:EKU25524.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
ptsH; phosphocarrier protein, nitrogen regulation associated
S3-18-all-fractions_k255_1812647_12
R_NC10_66_22, NC10, Bacteria

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10903..12702
DNA (1800bp) protein (600aa)
phosphoenolpyruvate-protein phosphotransferase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] id=15192451 bin=GWC2_NOV_55_46 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S3-18-all-fractions_k255_1812647_13
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12699..13052
DNA (354bp) protein (118aa)
Mannose-1-phosphate guanylyltransferase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RWX9_9DELT
cupin domain-containing protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
S3-18-all-fractions_k255_1812647_14
unknown

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13039..13290
DNA (252bp) protein (84aa)

This feature has no annotations

Displaying 14 items

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