ggKbase home page

S3-18-all-fractions_k255_1396667

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_1396667_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(2..442)
DNA (441bp) protein (147aa)
Putative transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC41_GEMAT
putative transcriptional regulator
Tax=RBG_16_Acidobacteria_68_9_curated
S3-18-all-fractions_k255_1396667_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

688..1257
DNA (570bp) protein (190aa)
Peptide deformylase id=4811764 bin=GWC2_Ignavibacteria_56_12 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
peptide deformylase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_1396667_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1261..3303)
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3R1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37138.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_1396667_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3407..3670
DNA (264bp) protein (88aa)
Ferredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC37_GEMAT
ferredoxin
Ferredoxin {ECO:0000313|EMBL:BAH40064.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_1396667_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3953..5278)
DNA (1326bp) protein (442aa)
putative 3-oxoadipate enol-lactonase (EC:3.1.1.24)
Putative 3-oxoadipate enol-lactonase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ01_9BACT
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_1396667_6
unknown

Not on your lists

5285..5455
DNA (171bp) protein (57aa)

This feature has no annotations

S3-18-all-fractions_k255_1396667_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5507..6688
DNA (1182bp) protein (394aa)
Putative ribonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
3'-5' exonuclease
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_1396667_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6685..6993)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC31_GEMAT
protein of unknown function DUF59
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_1396667_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7054..8217)
DNA (1164bp) protein (388aa)
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
beta-lactamase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S3-18-all-fractions_k255_1396667_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8229..9041)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC26_GEMAT
peptidase M10A and M12B matrixin and adamalysin
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_1396667_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9137..12076)
DNA (2940bp) protein (980aa)
DNA polymerase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H5_GEMAT
DNA polymerase I
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_1396667_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12100..13437)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H4_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_1396667_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

13582..14481
DNA (900bp) protein (300aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H3_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_1396667_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14478..15032
DNA (555bp) protein (185aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Orotate phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3H2_GEMAT
S3-18-all-fractions_k255_1396667_15
unknown

Not on your lists

15119..15427
DNA (309bp) protein (103aa)

This feature has no annotations

S3-18-all-fractions_k255_1396667_16
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15385..15906
DNA (522bp) protein (174aa)
Putative uncharacterized protein id=2230217 bin=GWB2_Geobacter-like_52_12 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB2_Geobacteraceae_52_12_curated
S3-18-all-fractions_k255_1396667_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15912..16319
DNA (408bp) protein (136aa)
Putative thiol-disulphide oxidoreductase DCC n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGN8_9BACT
Putative thiol-disulphide oxidoreductase DCC {ECO:0000313|EMBL:EEF61089.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
S3-18-all-fractions_k255_1396667_18
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16426..17259
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00037BC1AA
Peptidase M48 {ECO:0000313|EMBL:KJS18066.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
peptidase M48 Ste24p
S3-18-all-fractions_k255_1396667_19
unknown

Not on your lists

17438..17992
DNA (555bp) protein (185aa)

This feature has no annotations

S3-18-all-fractions_k255_1396667_20
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17989..18471
DNA (483bp) protein (161aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YAN1_9BRAD
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:EHR01071.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
histidine triad (HIT) protein
S3-18-all-fractions_k255_1396667_21
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

18468..18971
DNA (504bp) protein (168aa)
GCN5-related N-acetyltransferase id=2621730 bin=GWA2_Elusimicrobia_56_46 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
putative acetyltransferase
Tax=RBG_13_Bathyarchaeota_52_12_curated
S3-18-all-fractions_k255_1396667_22
unknown

Not on your lists

19011..19259
DNA (249bp) protein (83aa)

This feature has no annotations

S3-18-all-fractions_k255_1396667_23

Not on your lists

19256..19801
DNA (546bp) protein (182aa)
Putative metal-dependent hydrolase PaecuDRAFT_1994 n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I7J3_9BACL
DinB superfamily {ECO:0000313|EMBL:AIA12873.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S3-18-all-fractions_k255_1396667_24
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19886..20203
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KK46_SIMAS
membrane protein
Membrane protein {ECO:0000313|EMBL:AJP48672.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
S3-18-all-fractions_k255_1396667_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20184..21101)
DNA (918bp) protein (306aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G9_GEMAT
Helix-turn-helix, AraC domain-containing protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_1396667_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21348..24458
DNA (3111bp) protein (1037aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase {ECO:0000313|EMBL:BAH40792.1}; EC=2.7.11.1 {ECO:0000313|EMBL:BAH40792.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE65_GEMAT
S3-18-all-fractions_k255_1396667_27
unknown

Not on your lists

25055..25840
DNA (786bp) protein (262aa)

This feature has no annotations

S3-18-all-fractions_k255_1396667_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

25854..26732
DNA (879bp) protein (293aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
S3-18-all-fractions_k255_1396667_29
unknown

Not on your lists

comp(26734..27225)
DNA (492bp) protein (164aa)
hypothetical protein
S3-18-all-fractions_k255_1396667_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27308..28423)
DNA (1116bp) protein (372aa)
DNA polymerase III subunit beta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G7_GEMAT
DNA polymerase III, beta subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying items 1-30 of 48 in total

View Taxonomy