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S3-18-all-fractions_k255_5156314

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S3-18-all-fractions_k255_5156314_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2..1135
DNA (1134bp) protein (378aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C966_SPHTD
putative RNA polymerase, sigma-24 subunit, ECF subfamily
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S3-18-all-fractions_k255_5156314_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1269..3269)
DNA (2001bp) protein (667aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003692E5E
LVIVD repeat-containing protein
LVIVD repeat-containing protein {ECO:0000313|EMBL:AHG91658.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5156314_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3346..4020)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4U4_GEMAT
protein of unknown function DUF305
Uncharacterized protein {ECO:0000313|EMBL:AHG91657.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S3-18-all-fractions_k255_5156314_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4212..4829
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC57_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40084.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
S3-18-all-fractions_k255_5156314_5
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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4838..5314
DNA (477bp) protein (159aa)
Putative endoribonuclease L-PSP n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HXK6_9GAMM
endoribonuclease L-PSP
Tax=RBG_16_Gamma2_60_9_curated
S3-18-all-fractions_k255_5156314_6
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

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5322..5678
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035FFEF0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY49772.1}; Flags: Precursor;; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
S3-18-all-fractions_k255_5156314_7
unknown

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comp(5714..5965)
DNA (252bp) protein (84aa)

This feature has no annotations

S3-18-all-fractions_k255_5156314_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6001..8847)
DNA (2847bp) protein (949aa)
PAS/PAC sensor hybrid histidine kinase id=14623097 bin=bin5_DeltaP species=Zavarzinella formosa genus=Zavarzinella taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
PAS domain S-box
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
S3-18-all-fractions_k255_5156314_9
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8978..9811)
DNA (834bp) protein (278aa)
Oxidoreductase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RQ0_SYMTH
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:BAD39643.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
S3-18-all-fractions_k255_5156314_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(9829..10422)
DNA (594bp) protein (198aa)
DNA-binding ferritin-like protein (Oxidative damage protectant) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFW9_SINAD
DNA-binding ferritin-like protein
DNA-binding ferritin-like protein (Oxidative damage protectant) {ECO:0000313|EMBL:AGA28269.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
S3-18-all-fractions_k255_5156314_11
Halomonas sp. S2151, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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10604..10810
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A5Y0_ALKEH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJZ03802.1}; TaxID=579478 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. S2151.;"
S3-18-all-fractions_k255_5156314_12

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comp(10883..11629)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q84CW4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AAO91890.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S3-18-all-fractions_k255_5156314_13

Not on your lists

comp(11626..12876)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q84CW3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AAO91891.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S3-18-all-fractions_k255_5156314_14

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comp(13359..14837)
DNA (1479bp) protein (493aa)
Uncharacterized protein {ECO:0000313|EMBL:AHN97969.1}; TaxID=1447241 species="Bacteria; environmental samples.;" source="uncultured bacterium lac160.;"
Tetratricopeptide repeat protein id=3965264 bin=GWF2_Ignavibacteria_35_20 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
S3-18-all-fractions_k255_5156314_15
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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14978..16321
DNA (1344bp) protein (448aa)
cytochrome BD ubiquinol oxidase subunit I n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6CDCA
cytochrome bd ubiquinol oxidase subunit I
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ACL64348.1}; Flags: Precursor;; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
S3-18-all-fractions_k255_5156314_16
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16314..17345
DNA (1032bp) protein (344aa)
cytochrome BD ubiquinol oxidase subunit II n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B5371E
Cytochrome bd ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EPX61800.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
cytochrome bd-type quinol oxidase, subunit 2
S3-18-all-fractions_k255_5156314_17
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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17338..17868
DNA (531bp) protein (177aa)
GCN5-related N-acetyltransferase n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L1J8_FRASN
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABW11730.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
S3-18-all-fractions_k255_5156314_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(17873..19321)
DNA (1449bp) protein (483aa)
Amino acid/peptide transporter n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C32_SOLUE
amino acid/peptide transporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S3-18-all-fractions_k255_5156314_19
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(19490..20593)
DNA (1104bp) protein (368aa)
Putative uncharacterized protein id=4691060 bin=GWA2_Ignavibacteria_55_11 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
S3-18-all-fractions_k255_5156314_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(20601..21155)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6D6_GEMAT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
S3-18-all-fractions_k255_5156314_21
unknown

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21318..21722
DNA (405bp) protein (135aa)

This feature has no annotations

S3-18-all-fractions_k255_5156314_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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21727..22164
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9X9R0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63208.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
Displaying 22 items

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