ggKbase home page

08E140C01_Z5_2013_Ig3399_Hor_167_2013_Deltaproteobacteria_49_9

08E140C01_Z5_2013_IG3399_BJP_S1_SUB10_Syntrophobacterales_50_21_49_9
In projects: 08E140C01_Z5_2013_IG3399  |  horonobe_genomes

Consensus taxonomy: BJP_S1_SUB10_Syntrophobacterales_50_21  →  Syntrophobacterales  →  Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 151-200 of 225 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
08E140C01_z5_2013_Ig3399_v2_scaffold_2133
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
17 18172 bp 49.26 9.33 91.36
08E140C01_z5_2013_Ig3399_v2_scaffold_7277
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
6 5613 bp 52.77 8.42 91.40
08E140C01_z5_2013_Ig3399_v2_scaffold_7593
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
7 6931 bp 51.88 8.54 91.42
08E140C01_z5_2013_Ig3399_v2_scaffold_7482
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
6 5436 bp 49.98 7.81 91.50
08E140C01_z5_2013_Ig3399_v2_scaffold_1622
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
35 41905 bp 49.56 8.68 91.62
08E140C01_z5_2013_Ig3399_v2_scaffold_3756
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (55.56%)
9 11060 bp 57.48 9.46 91.63
08E140C01_z5_2013_Ig3399_v2_scaffold_1307
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
26 27802 bp 48.82 8.48 91.71
08E140C01_z5_2013_Ig3399_v2_scaffold_3364
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (90.91%)
11 12214 bp 46.97 8.22 91.72
08E140C01_z5_2013_Ig3399_v2_scaffold_1336
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (92.59%)
27 27281 bp 48.90 8.66 91.73
08E140C01_z5_2013_Ig3399_v2_scaffold_8690
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (66.67%)
6 4630 bp 44.04 8.54 91.75
08E140C01_z5_2013_Ig3399_v2_scaffold_3474
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
11 11904 bp 47.41 8.45 91.76
08E140C01_z5_2013_Ig3399_v2_scaffold_1092
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (97.5%)
40 35821 bp 48.39 9.04 91.78
08E140C01_z5_2013_Ig3399_v2_scaffold_1570
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
24 23661 bp 48.98 8.67 91.82
08E140C01_z5_2013_Ig3399_v2_scaffold_5553
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
8 7489 bp 47.64 9.21 91.85
08E140C01_z5_2013_Ig3399_v2_scaffold_3111
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
10 13099 bp 51.18 7.62 91.86
08E140C01_z5_2013_Ig3399_v2_scaffold_4245
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (90.91%)
11 9798 bp 46.11 9.74 91.96
08E140C01_z5_2013_Ig3399_v2_scaffold_3889
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (90.48%)
21 10671 bp 45.48 9.34 92.10
08E140C01_z5_2013_Ig3399_v2_scaffold_9225
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
2 4381 bp 49.49 7.24 92.10
08E140C01_z5_2013_Ig3399_v2_scaffold_1485
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (85.19%)
27 29703 bp 42.60 9.17 92.15
08E140C01_z5_2013_Ig3399_v2_scaffold_7091
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
4 5755 bp 49.64 8.79 92.22
08E140C01_z5_2013_Ig3399_v2_scaffold_3777
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
10 10999 bp 47.20 8.13 92.24
08E140C01_z5_2013_Ig3399_v2_scaffold_2410
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (82.35%)
17 16304 bp 43.31 8.37 92.31
08E140C01_z5_2013_Ig3399_v2_scaffold_10969
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
6 3711 bp 50.01 8.26 92.32
08E140C01_z5_2013_Ig3399_v2_scaffold_6087
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
6 6765 bp 44.79 8.75 92.37
08E140C01_z5_2013_Ig3399_v2_scaffold_2096
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (90.91%)
11 18472 bp 52.05 8.47 92.54
08E140C01_z5_2013_Ig3399_v2_scaffold_2729
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
12 14688 bp 48.60 8.04 92.67
08E140C01_z5_2013_Ig3399_v2_scaffold_1732
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (94.44%)
18 21780 bp 49.07 9.22 92.76
08E140C01_z5_2013_Ig3399_v2_scaffold_1468
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (97.87%)
47 48458 bp 47.19 8.66 92.78
08E140C01_z5_2013_Ig3399_v2_scaffold_1208
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (95.45%)
22 29516 bp 49.06 8.46 92.83
08E140C01_z5_2013_Ig3399_v2_scaffold_4338
Domain: Bacteria (80%)
10 9588 bp 39.42 7.23 92.86
08E140C01_z5_2013_Ig3399_v2_scaffold_3203
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (95.45%)
22 19192 bp 45.27 7.92 93.24
08E140C01_z5_2013_Ig3399_v2_scaffold_3824
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
8 10873 bp 52.66 9.60 93.29
08E140C01_z5_2013_Ig3399_v2_scaffold_5000
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (88.89%)
9 8269 bp 43.63 7.82 93.52
08E140C01_z5_2013_Ig3399_v2_scaffold_2386
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (87.5%)
16 16436 bp 44.32 9.31 93.62
08E140C01_z5_2013_Ig3399_v2_scaffold_6698
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
4 6106 bp 54.31 7.79 93.65
08E140C01_z5_2013_Ig3399_v2_scaffold_2172
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (96.15%)
26 30898 bp 49.02 8.62 93.69
08E140C01_z5_2013_Ig3399_v2_scaffold_942
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
37 41754 bp 45.30 8.70 93.76
08E140C01_z5_2013_Ig3399_v2_scaffold_3165
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
9 12902 bp 53.26 7.81 93.78
08E140C01_z5_2013_Ig3399_v2_scaffold_5747
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (83.33%)
6 7217 bp 51.66 8.79 93.78
08E140C01_z5_2013_Ig3399_v2_scaffold_5963
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
9 6936 bp 48.73 9.06 93.94
08E140C01_z5_2013_Ig3399_v2_scaffold_1698
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
24 22198 bp 45.11 8.91 94.09
08E140C01_z5_2013_Ig3399_v2_scaffold_6556
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
8 6259 bp 52.42 8.56 94.23
08E140C01_z5_2013_Ig3399_v2_scaffold_2076
Order: Syntrophobacterales (57.14%)
7 18615 bp 55.44 8.76 94.39
08E140C01_z5_2013_Ig3399_v2_scaffold_7486
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
5 5434 bp 51.75 9.11 94.41
08E140C01_z5_2013_Ig3399_v2_scaffold_11035
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
3 3688 bp 51.08 9.01 94.77
08E140C01_z5_2013_Ig3399_v2_scaffold_2428
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (94.44%)
18 18778 bp 52.40 8.12 94.87
08E140C01_z5_2013_Ig3399_v2_scaffold_3513
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (88.89%)
9 11753 bp 48.00 9.35 95.01
08E140C01_z5_2013_Ig3399_v2_scaffold_5590
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (87.5%)
8 8493 bp 43.94 8.87 95.05
08E140C01_z5_2013_Ig3399_v2_scaffold_9421
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
5 4301 bp 49.66 7.06 95.14
08E140C01_z5_2013_Ig3399_v2_scaffold_11704
Species: BJP_S1_SUB10_Syntrophobacterales_50_21 (100%)
4 3487 bp 54.23 8.88 95.24
Displaying items 151-200 of 225 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.