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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 851-900 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_29715
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1437 bp 55.88 4.31 95.41
bjp_ig2102_scaffold_33333
Species: BJP_08E140C01_Anaerolineales_40_8 (50%)
2 1305 bp 39.69 3.93 85.98
bjp_ig2102_scaffold_43925
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1030 bp 52.33 5.13 98.16
bjp_ig2102_scaffold_29205
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1457 bp 53.88 3.83 100.48
bjp_ig2102_scaffold_27800
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1518 bp 52.31 3.48 91.50
bjp_ig2102_scaffold_39232
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1137 bp 45.65 3.85 77.31
bjp_ig2102_scaffold_31137
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1383 bp 45.12 5.02 73.32
bjp_ig2102_scaffold_34274
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1273 bp 50.59 3.44 81.30
bjp_ig2102_scaffold_30858
Species: Treponema caldarium (50%)
2 1393 bp 55.28 4.55 70.64
bjp_ig2102_scaffold_20075
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1990 bp 46.03 3.57 101.46
bjp_ig2102_scaffold_39235
Species: BJP_IG2103_Clostridiales_50_15 (100%)
2 1137 bp 48.28 4.25 79.42
bjp_ig2102_scaffold_36003
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1222 bp 52.95 4.20 87.40
bjp_ig2102_scaffold_33084
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1315 bp 53.38 3.90 96.96
bjp_ig2102_scaffold_24733
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1671 bp 52.36 3.89 100.18
bjp_ig2102_scaffold_13686
Species: Treponema brennaborense (50%)
2 2738 bp 52.08 4.96 94.23
bjp_ig2102_scaffold_19438
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2042 bp 53.53 4.88 90.94
bjp_ig2102_scaffold_21998
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1844 bp 50.76 4.50 98.59
bjp_ig2102_scaffold_35839
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1227 bp 48.74 4.92 82.64
bjp_ig2102_scaffold_31400
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1373 bp 45.01 4.29 97.67
bjp_ig2102_scaffold_25969
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1606 bp 52.37 3.85 100.13
bjp_ig2102_scaffold_41466
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1084 bp 45.57 4.60 99.08
bjp_ig2102_scaffold_25459
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1633 bp 45.07 4.81 89.10
bjp_ig2102_scaffold_20596
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1946 bp 46.35 5.97 78.62
bjp_ig2102_scaffold_41724
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1078 bp 40.35 5.60 84.88
bjp_ig2102_scaffold_40052
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 1117 bp 52.73 3.51 79.23
bjp_ig2102_scaffold_44541
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1018 bp 46.76 3.41 101.08
bjp_ig2102_scaffold_12317
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2982 bp 54.46 5.32 99.09
bjp_ig2102_scaffold_28877
Species: Sphaerochaeta pleomorpha (100%)
2 1472 bp 56.86 3.80 99.25
bjp_ig2102_scaffold_16509
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2345 bp 54.41 5.15 94.93
bjp_ig2102_scaffold_42317
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1064 bp 53.48 3.69 100.66
bjp_ig2102_scaffold_44030
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1028 bp 54.47 3.67 93.09
bjp_ig2102_scaffold_22926
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1784 bp 48.54 4.99 88.62
bjp_ig2102_scaffold_44799
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 1012 bp 55.73 3.58 85.38
bjp_ig2102_scaffold_35591
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1234 bp 51.78 4.41 87.76
bjp_ig2102_scaffold_26895
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1562 bp 50.51 5.03 97.38
bjp_ig2102_scaffold_31663
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1364 bp 49.56 5.20 88.64
bjp_ig2102_scaffold_38551
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1154 bp 49.65 3.53 77.47
bjp_ig2102_scaffold_42831
Species: Sphaerochaeta globosa (50%)
2 1053 bp 49.00 2.72 69.80
bjp_ig2102_scaffold_17040
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
2 2284 bp 50.18 5.16 64.36
bjp_ig2102_scaffold_14888
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2558 bp 54.65 4.55 97.69
bjp_ig2102_scaffold_10689
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 3361 bp 43.41 4.94 96.13
bjp_ig2102_scaffold_15841
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 2428 bp 46.62 5.85 80.68
bjp_ig2102_scaffold_33609
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1295 bp 56.60 5.01 97.07
bjp_ig2102_scaffold_37425
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1183 bp 54.52 3.83 99.15
bjp_ig2102_scaffold_24234
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1703 bp 55.49 3.72 89.14
bjp_ig2102_scaffold_40058
Species: Sphaerochaeta pleomorpha (50%)
2 1117 bp 52.73 3.92 98.57
bjp_ig2102_scaffold_29994
Species: BJP_08E140C01_Spirochaeta_53_29 (50%)
2 1426 bp 49.72 3.92 101.61
bjp_ig2102_scaffold_27307
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1541 bp 53.54 3.53 98.31
bjp_ig2102_scaffold_19707
Species: GWC2_Spirochaetes_52_13_curated (50%)
2 2020 bp 54.46 4.63 100.10
bjp_ig2102_scaffold_39251
Species: GWC2_Spirochaetes_52_13_curated (100%)
2 1136 bp 52.20 5.45 98.77
Displaying items 851-900 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.