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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 951-1000 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_36878
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1198 bp 53.76 5.17 99.92
bjp_ig2102_scaffold_39343
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1133 bp 53.66 3.47 97.44
bjp_ig2102_scaffold_38647
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1152 bp 53.99 4.06 97.14
bjp_ig2102_scaffold_44897
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1010 bp 53.76 3.59 99.80
bjp_ig2102_scaffold_14986
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 2544 bp 44.69 4.10 100.00
bjp_ig2102_scaffold_21338
Species: Sphaerochaeta coccoides (100%)
1 1889 bp 49.18 4.08 99.89
bjp_ig2102_scaffold_34904
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1254 bp 55.66 3.13 92.58
bjp_ig2102_scaffold_25314
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1641 bp 49.36 4.32 98.72
bjp_ig2102_scaffold_42684
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1056 bp 56.63 4.86 100.00
bjp_ig2102_scaffold_37279
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1187 bp 56.61 3.05 99.83
bjp_ig2102_scaffold_38151
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1164 bp 49.66 3.24 89.43
bjp_ig2102_scaffold_32571
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1332 bp 50.90 4.53 80.86
bjp_ig2102_scaffold_37796
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1173 bp 53.96 5.28 78.26
bjp_ig2102_scaffold_40684
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1101 bp 55.40 3.15 99.73
bjp_ig2102_scaffold_21869
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1853 bp 55.80 4.24 90.83
bjp_ig2102_scaffold_35198
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1246 bp 56.02 3.88 99.92
bjp_ig2102_scaffold_31014
Species: RBG_13_OP8X_37_8_curated (100%)
1 1388 bp 53.82 3.92 76.08
bjp_ig2102_scaffold_44666
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1015 bp 47.98 3.87 87.49
bjp_ig2102_scaffold_41086
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1093 bp 48.86 2.49 99.91
bjp_ig2102_scaffold_34671
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1260 bp 48.17 3.72 99.76
bjp_ig2102_scaffold_34678
Species: Sphaerochaeta pleomorpha (100%)
1 1260 bp 53.25 3.83 79.52
bjp_ig2102_scaffold_39126
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1140 bp 56.40 4.90 100.00
bjp_ig2102_scaffold_28248
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1498 bp 44.26 5.24 66.29
bjp_ig2102_scaffold_44427
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1020 bp 51.57 5.18 100.00
bjp_ig2102_scaffold_42973
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1050 bp 55.81 4.17 99.71
bjp_ig2102_scaffold_44176
Species: Sphaerochaeta pleomorpha (100%)
1 1025 bp 55.22 3.24 99.80
bjp_ig2102_scaffold_40713
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1101 bp 52.13 3.15 45.50
bjp_ig2102_scaffold_30762
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1397 bp 51.32 4.11 99.86
bjp_ig2102_scaffold_28516
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1487 bp 56.15 6.30 99.87
bjp_ig2102_scaffold_41364
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1086 bp 52.21 3.20 91.71
bjp_ig2102_scaffold_29373
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1450 bp 49.31 4.58 99.93
bjp_ig2102_scaffold_33503
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1298 bp 56.70 3.84 99.85
bjp_ig2102_scaffold_16408
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 2357 bp 50.49 4.23 99.92
bjp_ig2102_scaffold_40721
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1101 bp 54.95 4.53 99.73
bjp_ig2102_scaffold_21142
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1903 bp 53.44 3.25 94.27
bjp_ig2102_scaffold_33001
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1318 bp 55.61 3.90 85.81
bjp_ig2102_scaffold_32105
Species: Sphaerochaeta coccoides (100%)
1 1348 bp 50.45 5.49 95.03
bjp_ig2102_scaffold_11901
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 3074 bp 50.91 4.52 90.27
bjp_ig2102_scaffold_39930
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1120 bp 56.16 4.18 99.64
bjp_ig2102_scaffold_37853
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1171 bp 55.42 4.77 99.66
bjp_ig2102_scaffold_22334
Species: BJP_IG2103_Clostridiales_50_15 (100%)
1 1822 bp 49.73 4.97 99.95
bjp_ig2102_scaffold_41646
Species: Sphaerochaeta coccoides (100%)
1 1080 bp 53.70 4.05 65.28
bjp_ig2102_scaffold_30025
Species: GWB1_Spirochaetes_59_5_curated (100%)
1 1425 bp 49.96 3.39 79.58
bjp_ig2102_scaffold_30795
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1396 bp 51.43 4.00 79.30
bjp_ig2102_scaffold_34731
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1258 bp 52.86 3.72 99.92
bjp_ig2102_scaffold_30035
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1424 bp 48.74 5.09 99.86
bjp_ig2102_scaffold_33542
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1297 bp 53.28 4.66 99.69
bjp_ig2102_scaffold_12514
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 2942 bp 46.30 4.36 94.43
bjp_ig2102_scaffold_42770
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1054 bp 56.36 4.58 80.27
bjp_ig2102_scaffold_40252
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1112 bp 48.65 3.94 75.54
Displaying items 951-1000 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.