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BJP_IG2102_Hor_167_2014_GWC2_Spirochaete_51_5

BJP_IG2102_Spirochaetes_51_5
In projects: 08E140C01_zone5_2014  |  horonobe_genomes

Consensus taxonomy: Spirochaetes  →  Bacteria

Description

Moderate, probably partial

Displaying items 901-950 of 1040 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
bjp_ig2102_scaffold_32972
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1319 bp 52.62 3.89 99.85
bjp_ig2102_scaffold_35598
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1234 bp 54.13 4.04 99.92
bjp_ig2102_scaffold_41479
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1083 bp 56.14 4.32 90.58
bjp_ig2102_scaffold_36283
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1214 bp 53.46 4.73 99.84
bjp_ig2102_scaffold_36797
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1200 bp 53.17 4.15 99.75
bjp_ig2102_scaffold_27063
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1553 bp 50.61 5.25 96.20
bjp_ig2102_scaffold_40587
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1104 bp 52.99 4.10 99.73
bjp_ig2102_scaffold_36038
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1221 bp 43.82 3.83 66.34
bjp_ig2102_scaffold_35359
Species: BJP_IG2157_Clostridiales_52_13 (100%)
1 1242 bp 53.30 3.65 92.27
bjp_ig2102_scaffold_41240
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1089 bp 52.43 5.69 98.07
bjp_ig2102_scaffold_29504
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1445 bp 48.51 4.60 99.86
bjp_ig2102_scaffold_22954
Species: RBG_13_Spirochaetes_68_11_curated (100%)
1 1783 bp 52.27 5.08 87.49
bjp_ig2102_scaffold_20627
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1944 bp 48.20 3.03 100.00
bjp_ig2102_scaffold_34827
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1255 bp 50.84 3.49 98.49
bjp_ig2102_scaffold_36812
Species: Spirochaeta smaragdinae (100%)
1 1200 bp 52.17 4.28 99.75
bjp_ig2102_scaffold_43720
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1034 bp 49.03 3.80 93.13
bjp_ig2102_scaffold_37713
Species: Sphaerochaeta pleomorpha (100%)
1 1175 bp 52.34 3.86 99.83
bjp_ig2102_scaffold_37458
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1182 bp 52.71 3.32 99.75
bjp_ig2102_scaffold_40858
Species: marine sediment metagenome (100%)
1 1098 bp 54.46 4.13 100.00
bjp_ig2102_scaffold_22707
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1798 bp 51.50 5.12 81.76
bjp_ig2102_scaffold_43468
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1040 bp 52.79 5.52 99.81
bjp_ig2102_scaffold_44581
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1017 bp 51.72 3.71 99.71
bjp_ig2102_scaffold_40351
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1110 bp 48.92 5.17 64.05
bjp_ig2102_scaffold_28668
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1481 bp 54.69 3.87 99.87
bjp_ig2102_scaffold_26684
Species: RIFOXYB12_FULL_Lentisphaerae_65_16_curated (100%)
1 1572 bp 53.24 3.75 99.81
bjp_ig2102_scaffold_33653
Species: Sphaerochaeta pleomorpha (100%)
1 1293 bp 55.76 3.74 100.00
bjp_ig2102_scaffold_29527
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1444 bp 42.94 5.02 99.93
bjp_ig2102_scaffold_45391
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1000 bp 50.00 5.13 99.60
bjp_ig2102_scaffold_33657
Species: GWC2_Spirochaetes_52_13_curated (50%)
1 1293 bp 51.04 5.61 72.85
bjp_ig2102_scaffold_44082
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1027 bp 50.05 5.44 99.90
bjp_ig2102_scaffold_43740
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1034 bp 49.32 4.38 99.81
bjp_ig2102_scaffold_38604
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1153 bp 54.29 5.37 99.91
bjp_ig2102_scaffold_41529
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1082 bp 54.71 5.30 90.67
bjp_ig2102_scaffold_34857
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1255 bp 52.35 3.61 77.45
bjp_ig2102_scaffold_36585
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1206 bp 54.73 4.38 99.75
bjp_ig2102_scaffold_42121
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1068 bp 53.56 4.95 91.85
bjp_ig2102_scaffold_27362
Species: RBG_16_RIF03_38_10_curated (100%)
1 1538 bp 50.98 3.14 99.87
bjp_ig2102_scaffold_33410
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1302 bp 52.00 5.57 89.63
bjp_ig2102_scaffold_39563
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1128 bp 47.61 2.95 97.61
bjp_ig2102_scaffold_26189
Species: GWC1_Treponema_61_84_curated (100%)
1 1596 bp 55.70 4.16 99.81
bjp_ig2102_scaffold_35915
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1224 bp 44.04 3.70 59.80
bjp_ig2102_scaffold_32277
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1342 bp 47.09 3.60 99.93
bjp_ig2102_scaffold_29301
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1453 bp 51.75 4.05 93.12
bjp_ig2102_scaffold_38117
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1165 bp 47.30 4.80 99.66
bjp_ig2102_scaffold_35670
Species: RBG_13_Chloroflexi_48_10_curated (100%)
1 1232 bp 49.43 4.90 49.68
bjp_ig2102_scaffold_42403
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1062 bp 55.37 3.98 78.53
bjp_ig2102_scaffold_38894
Species: BJP_08E140C01_Spirochaeta_53_29 (100%)
1 1146 bp 49.13 3.95 100.00
bjp_ig2102_scaffold_41815
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1076 bp 43.68 3.93 95.91
bjp_ig2102_scaffold_27649
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1525 bp 53.38 5.25 99.74
bjp_ig2102_scaffold_40915
Species: GWC2_Spirochaetes_52_13_curated (100%)
1 1097 bp 50.87 3.17 99.82
Displaying items 901-950 of 1040 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.