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13_1_20CM_4_Bacteriodetes_60_6

13_1_20CM_4_Bacteria_61_7
In projects: 13_1_20CM_4  |  angelo_ncbi_2016  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: 13_1_20cm_4_UNK

Properties

Avg. coverage: 6.87 Longest contig: 25.24 Kbp Bin length: 5.94 Mbp GC content: 60.62 %
Contigs count: 3728 Features count: 6853 rRNAs count: 0 tRNAs count: 10

Genome completeness

partial RP 12 / 55 MC: 1 BSCG 11 / 51 MC: 2 ASCG 5 / 38 MC: 1

Description

<1 partial genome-CB

Displaying items 3601-3650 of 3728 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_20cm_4_scaffold_216626
Species: Candidatus Entotheonella sp. TSY1 (100%)
2 1145 bp 65.76 4.38 100.35
13_1_20cm_4_scaffold_226509
Species: RLO_RIF_CHLX_71_12 (100%)
2 1115 bp 69.78 12.61 100.36
13_1_20cm_4_scaffold_105968
Species: Pyrinomonas methylaliphatogenes (50%)
2 1584 bp 68.43 6.18 100.38
13_1_20cm_4_scaffold_249727
Species: Verrucomicrobiae bacterium DG1235 (50%)
2 1049 bp 53.67 4.79 100.38
13_1_20cm_4_scaffold_224807
Species: R_Gemmatimonadetes_71_11 (50%)
2 1120 bp 61.88 3.59 100.45
13_1_20cm_4_scaffold_125735
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1472 bp 56.93 5.46 100.48
13_1_20cm_4_scaffold_20424
Species: marine sediment metagenome (50%)
2 3173 bp 72.01 6.49 100.50
13_1_20cm_4_scaffold_213128
Species: RBG_16_Chloroflexi_50_9_curated (50%)
2 1155 bp 52.03 4.78 100.52
13_1_20cm_4_scaffold_45820
Species: uncultured bacterium (50%)
2 2268 bp 65.04 14.28 100.53
13_1_20cm_4_scaffold_112286
Phylum: Bacteroidetes (66.67%)
3 1545 bp 68.22 15.92 100.58
13_1_20cm_4_scaffold_114903
Species: Niastella koreensis (50%)
2 1530 bp 33.01 2.95 100.59
13_1_20cm_4_scaffold_208459
Species: Flavihumibacter sp. ZG627 (50%)
2 1169 bp 45.77 3.22 100.60
13_1_20cm_4_scaffold_128408
Species: Opitutus terrae (50%)
2 1458 bp 53.02 5.34 100.62
13_1_20cm_4_scaffold_83295
Species: BJP_08E140C01_Clostridiales_46_19 (50%)
2 1756 bp 61.56 5.86 100.63
13_1_20cm_4_scaffold_231869
Species: RBG_16_Actinobacteria_68_12_curated (100%)
2 1100 bp 67.09 2.97 100.64
13_1_20cm_4_scaffold_143069
Species: RLO_Deltaproteobacteria_60_16 (100%)
2 1389 bp 76.46 3.98 100.65
13_1_20cm_4_scaffold_197516
Order: Sphingobacteriales (66.67%)
3 1201 bp 34.89 2.30 100.67
13_1_20cm_4_scaffold_134620
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1427 bp 57.32 3.17 100.70
13_1_20cm_4_scaffold_219955
Species: Prevotella sp. CAG:924 (50%)
2 1135 bp 51.10 4.20 100.71
13_1_20cm_4_scaffold_56525
Species: Rhodothermus marinus (50%)
4 3386 bp 61.67 6.45 100.74
13_1_20cm_4_scaffold_197703
Species: Niastella koreensis (100%)
2 1200 bp 44.67 1.67 100.75
13_1_20cm_4_scaffold_61508
Species: Cylindrospermum stagnale (50%)
2 1998 bp 68.37 26.26 100.75
13_1_20cm_4_scaffold_64451
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1959 bp 75.91 16.78 100.77
13_1_20cm_4_scaffold_133681
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1432 bp 64.59 8.24 100.77
13_1_20cm_4_scaffold_80337
Phylum: Gemmatimonadetes (100%)
3 1783 bp 67.64 8.31 100.79
13_1_20cm_4_scaffold_96844
Species: BJP_IG2102_Coriobacteriales_64_17 (50%)
2 1646 bp 68.35 9.45 100.79
13_1_20cm_4_scaffold_53500
Domain: Bacteria (100%)
3 2122 bp 70.55 22.36 100.80
13_1_20cm_4_scaffold_126024
Species: Niastella koreensis (50%)
2 1470 bp 42.93 2.73 100.82
13_1_20cm_4_scaffold_158730
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1327 bp 64.96 11.35 100.83
13_1_20cm_4_scaffold_239547
Species: uncultured bacterium (100%)
2 1077 bp 57.10 7.46 100.84
13_1_20cm_4_scaffold_203289
Species: uncultured bacterium (100%)
2 1184 bp 55.74 6.15 100.85
13_1_20cm_4_scaffold_9223
Species: Gemmatimonadetes bacterium KBS708 (100%)
6 8338 bp 70.21 13.28 100.85
13_1_20cm_4_scaffold_5368
Species: Gemmatimonadetes bacterium KBS708 (80%)
5 7260 bp 63.26 11.86 100.87
13_1_20cm_4_scaffold_150439
Genus: Flavihumibacter (66.67%)
3 1359 bp 43.93 3.69 100.88
13_1_20cm_4_scaffold_184645
Species: Cyclobacterium qasimii (50%)
2 1240 bp 36.21 2.43 100.89
13_1_20cm_4_scaffold_16788
Species: Gemmatimonadetes bacterium KBS708 (50%)
4 3434 bp 68.84 11.77 100.90
13_1_20cm_4_scaffold_230843
Species: RLO_RIF_CHLX_71_12 (50%)
2 1103 bp 64.46 6.14 100.91
13_1_20cm_4_scaffold_60293
Species: Gemmatimonadetes bacterium KBS708 (60%)
5 2972 bp 65.68 11.74 100.94
13_1_20cm_4_scaffold_245144
Species: Prevotella sp. CAG:279 (50%)
2 1061 bp 68.90 4.02 100.94
13_1_20cm_4_scaffold_182203
Species: Rhodothermus marinus (50%)
2 1248 bp 68.27 4.42 100.96
13_1_20cm_4_scaffold_128812
Species: Pyrinomonas methylaliphatogenes (50%)
2 1456 bp 67.31 5.34 100.96
13_1_20cm_4_scaffold_182231
Species: GWF2_Bacteroidetes_38_335_curated (50%)
2 2385 bp 66.42 4.53 101.01
13_1_20cm_4_scaffold_142917
Species: Pyrinomonas methylaliphatogenes (50%)
2 1390 bp 65.90 23.66 101.01
13_1_20cm_4_scaffold_200857
Species: Streptomyces rubellomurinus (50%)
2 1191 bp 73.05 5.06 101.01
13_1_20cm_4_scaffold_204974
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated (50%)
2 1179 bp 70.91 5.11 101.02
13_1_20cm_4_scaffold_156923
Species: Gemmatimonadetes bacterium KBS708 (100%)
2 1957 bp 63.57 4.87 101.02
13_1_20cm_4_scaffold_243561
Species: RLO_Gemmatimonadetes_68_9 (50%)
2 1066 bp 68.86 11.07 101.03
13_1_20cm_4_scaffold_188004
Species: [Clostridium] symbiosum (50%)
2 1229 bp 71.03 11.85 101.06
13_1_20cm_4_scaffold_138376
Species: GWF2_Bacteroidetes_43_11_curated (50%)
2 1410 bp 64.61 5.34 101.06
13_1_20cm_4_scaffold_255286
Species: Flavobacterium sp. F52 (50%)
2 1033 bp 53.34 1.94 101.07
Displaying items 3601-3650 of 3728 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.