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13_1_20CM_4_Cyanobacteria_61_6

13_1_20CM_4_Bacteria_61_6
In projects: 13_1_20CM_4  |  angelo_ncbi_2016  |  meta-analysis_of_species_overlap_in_grassland_soils_environments

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: 13_1_20cm_4_UNK

Properties

Avg. coverage: 6.14 Longest contig: 9.28 Kbp Bin length: 5.76 Mbp GC content: 60.73 %
Contigs count: 3730 Features count: 6540 rRNAs count: 0 tRNAs count: 17

Genome completeness

partial RP 5 / 55 MC: 1 BSCG 5 / 51 MC: 1 ASCG 2 / 38 MC: 1

Description

All Cyanos. <1 partial genome-CB

Displaying items 3601-3650 of 3730 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
13_1_20cm_4_scaffold_187551
Species: Burkholderia grimmiae (50%)
2 1231 bp 71.24 7.75 100.41
13_1_20cm_4_scaffold_27012
Domain: Bacteria (100%)
3 2832 bp 70.16 7.18 100.42
13_1_20cm_4_scaffold_141827
Species: Streptomyces cyaneogriseus (50%)
2 1395 bp 64.73 9.18 100.43
13_1_20cm_4_scaffold_43562
Species: RLO_Deltaproteobacteria_60_19 (50%)
4 2315 bp 73.65 9.32 100.43
13_1_20cm_4_scaffold_101195
Species: RBG_16_Zixibacteria_43_9_curated (50%)
2 1616 bp 52.72 4.50 100.43
13_1_20cm_4_scaffold_106660
Domain: Bacteria (66.67%)
3 1580 bp 72.97 10.33 100.44
13_1_20cm_4_scaffold_112587
Species: Nostoc punctiforme (50%)
2 1544 bp 54.15 3.25 100.45
13_1_20cm_4_scaffold_160371
Species: RBG_16_Caldithrix_48_16_curated (50%)
2 1320 bp 59.47 8.37 100.46
13_1_20cm_4_scaffold_234220
Species: Candidatus Solibacter usitatus (50%)
2 1093 bp 55.26 3.90 100.46
13_1_20cm_4_scaffold_163784
Species: GWE1_Thiobacillus_62_9_curated (66.67%)
3 1308 bp 65.75 5.37 100.46
13_1_20cm_4_scaffold_167292
Species: R_Burkholderiales_67_14 (50%)
2 1296 bp 71.30 7.55 100.46
13_1_20cm_4_scaffold_258861
Species: Opitutus terrae (50%)
2 1024 bp 56.74 3.19 100.49
13_1_20cm_4_scaffold_262331
Species: R_Gemmatimonadetes_71_11 (50%)
2 1015 bp 69.95 7.17 100.49
13_1_20cm_4_scaffold_78899
Species: Coleofasciculus chthonoplastes (50%)
2 1797 bp 47.86 3.77 100.50
13_1_20cm_4_scaffold_148607
Species: Gloeobacter violaceus (50%)
2 1367 bp 56.25 2.75 100.51
13_1_20cm_4_scaffold_152109
Species: GWC2_Elusimicrobia_64_44_curated (50%)
2 1352 bp 65.01 3.16 100.52
13_1_20cm_4_scaffold_74794
Species: Microcoleus vaginatus (50%)
2 1838 bp 71.87 6.28 100.54
13_1_20cm_4_scaffold_182296
Species: Gloeobacter kilaueensis (50%)
2 1247 bp 57.66 6.64 100.56
13_1_20cm_4_scaffold_137380
Phylum: Acidobacteria (66.67%)
3 1414 bp 54.46 3.02 100.57
13_1_20cm_4_scaffold_247150
Species: RLO_RIF02_62_27 (50%)
2 1056 bp 54.64 6.18 100.57
13_1_20cm_4_scaffold_267273
Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)
2 1002 bp 53.89 5.01 100.60
13_1_20cm_4_scaffold_135601
Species: Gloeobacter violaceus (50%)
2 1422 bp 70.68 3.35 100.63
13_1_20cm_4_scaffold_93745
Species: Moorea producens (50%)
2 1669 bp 71.90 8.87 100.66
13_1_20cm_4_scaffold_204750
Species: Gloeobacter violaceus (50%)
2 1180 bp 55.93 3.19 100.68
13_1_20cm_4_scaffold_223021
Species: Caldatribacterium saccharofermentans (50%)
2 1126 bp 74.78 3.57 100.71
13_1_20cm_4_scaffold_189732
Phylum: Proteobacteria (60%)
5 2085 bp 69.26 8.07 100.72
13_1_20cm_4_scaffold_228986
Species: Calothrix parietina (50%)
2 1108 bp 64.53 4.30 100.72
13_1_20cm_4_scaffold_230084
Species: GWC2_Gemmatimonadetes_71_10_curated (50%)
2 1105 bp 67.78 3.63 100.72
13_1_20cm_4_scaffold_129930
Species: Gemmatimonadetes bacterium KBS708 (66.67%)
3 2609 bp 66.62 3.94 100.73
13_1_20cm_4_scaffold_198861
Species: Aphanizomenon flos-aquae (50%)
2 1197 bp 66.75 2.94 100.75
13_1_20cm_4_scaffold_104186
Species: BJP_IG2103_Methanoregula_55_19 (50%)
2 1596 bp 57.52 3.62 100.75
13_1_20cm_4_scaffold_136081
Species: Gloeobacter violaceus (50%)
2 1420 bp 68.59 3.54 100.77
13_1_20cm_4_scaffold_213135
Species: R_Acidobacteria_61_28 (50%)
2 1155 bp 55.58 4.35 100.78
13_1_20cm_4_scaffold_113788
Domain: Bacteria (100%)
3 1536 bp 60.29 11.11 100.78
13_1_20cm_4_scaffold_144180
Species: Gloeocapsa sp. PCC 7428 (66.67%)
3 1384 bp 54.05 3.99 100.79
13_1_20cm_4_scaffold_184209
Species: R_Acidobacteria_68_18 (50%)
2 1241 bp 64.54 7.08 100.81
13_1_20cm_4_scaffold_89657
Domain: Bacteria (66.67%)
3 1702 bp 63.63 5.01 100.82
13_1_20cm_4_scaffold_66718
Domain: Bacteria (66.67%)
3 1931 bp 71.26 5.33 100.83
13_1_20cm_4_scaffold_210531
Species: Hassallia byssoidea (100%)
2 1163 bp 49.53 2.81 100.86
13_1_20cm_4_scaffold_251424
Species: Dactylococcopsis salina (50%)
2 1044 bp 67.15 4.09 100.86
13_1_20cm_4_scaffold_127878
Species: Moorea producens (50%)
2 1460 bp 72.05 4.99 100.89
13_1_20cm_4_scaffold_193426
Species: Candidatus Methanoperedens nitroreducens (50%)
2 1213 bp 67.27 5.79 100.91
13_1_20cm_4_scaffold_41183
Species: Cyanothece sp. CCY0110 (50%)
2 2372 bp 69.14 5.93 100.93
13_1_20cm_4_scaffold_146918
Species: RLO_PLX_64_10 (50%)
2 1373 bp 52.29 2.74 100.95
13_1_20cm_4_scaffold_126322
Species: Chroococcidiopsis thermalis (50%)
2 1468 bp 66.35 3.25 100.95
13_1_20cm_4_scaffold_187781
Species: Gloeobacter kilaueensis (50%)
2 1230 bp 66.67 7.14 100.98
13_1_20cm_4_scaffold_260665
Species: Gemmatimonadetes bacterium KBS708 (50%)
2 1019 bp 63.89 3.45 100.98
13_1_20cm_4_scaffold_58314
Species: Nostoc sp. PCC 7107 (50%)
2 2043 bp 52.03 3.93 101.03
13_1_20cm_4_scaffold_59797
Species: Oscillatoria nigro-viridis (50%)
2 2022 bp 58.26 3.60 101.04
13_1_20cm_4_scaffold_267985
Species: CG_Arma_02 (50%)
2 1000 bp 55.30 6.78 101.10
Displaying items 3601-3650 of 3730 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.