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13_1_40cm_2_scaffold_3696

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3696_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..769
DNA (768bp) protein (256aa)
engA; GTP-binding protein EngA; K03977 GTP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GTPase Der id=4853970 bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
small GTP-binding protein domain-containing protein
13_1_40cm_2_scaffold_3696_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

766..1635
DNA (870bp) protein (290aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4853971 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_1_40cm_2_scaffold_3696_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1643..2599
DNA (957bp) protein (319aa)
Blr0521 protein id=4853972 bin=GWA2_Methylomirabilis_73_35 species=Tropheryma whipplei genus=Tropheryma taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
alginate regulatory protein AlgP
13_1_40cm_2_scaffold_3696_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2609..2890
DNA (282bp) protein (94aa)
histone family protein DNA-binding protein; K04764 integration host factor subunit alpha Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Integration host factor, alpha subunit id=4853973 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ihfA-1; integration host factor subunit alpha
13_1_40cm_2_scaffold_3696_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2959..3252
DNA (294bp) protein (98aa)
Transcriptional regulator, MerR family id=4853974 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MerR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
regulatory protein MerR
13_1_40cm_2_scaffold_3696_trna_1
unknown

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3291..3364
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_3696_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3380..4159
DNA (780bp) protein (260aa)
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5'-nucleotidase SurE id=4853975 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
surE; 5'(3')-nucleotidase/polyphosphatase
13_1_40cm_2_scaffold_3696_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4159..4815
DNA (657bp) protein (219aa)
protein-L-isoaspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protein-L-isoaspartate O-methyltransferase 1 id=4853976 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein-L-isoaspartate O-methyltransferase
13_1_40cm_2_scaffold_3696_trna_2
unknown

Not on your lists

4846..4919
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_3696_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4991..5290
DNA (300bp) protein (100aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=GWA2_Rokubacteria_73_35_curated
Acylphosphatase id=4853977 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acylphosphatase
13_1_40cm_2_scaffold_3696_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5299..6117
DNA (819bp) protein (273aa)
peptidase M23B Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NlpD; membrane protein id=14626518 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
peptidase M23B
13_1_40cm_2_scaffold_3696_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6110..7030
DNA (921bp) protein (307aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNA polymerase sigma factor id=4853978 bin=GWA2_Methylomirabilis_73_35 species=Selenomonas noxia genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sigma-70 family RNA polymerase sigma factor
13_1_40cm_2_scaffold_3696_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7049..7543)
DNA (495bp) protein (165aa)
id=2696010 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=2696010 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_2_scaffold_3696_12
unknown

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comp(7646..7873)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_2_scaffold_3696_13
unknown

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comp(7988..8440)
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_2_scaffold_3696_14
unknown

Not on your lists

comp(8500..8730)
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying 16 items

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