name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_112330_1
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3..128)
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ABC-type sugar transport system, ATPase component (EC:3.6.3.17)
Putative sugar ABC transporter, ATP-binding protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFD7_9BRAD
Putative sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CCE05175.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
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berkeley_reactor_200306_biofilm_scaffold_112330_2
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria
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Not on your lists |
297..1067
|
Glycosyl transferase family 2 n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BDY7_MEISD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADH63138.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
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berkeley_reactor_200306_biofilm_scaffold_112330_3
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria
|
Not on your lists |
1134..1874
|
short-chain dehydrogenase n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484E0F
short chain dehydrogenase/reductase family oxidoreductase
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:ABW28875.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
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berkeley_reactor_200306_biofilm_scaffold_112330_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1917..2372)
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hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030C4638
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:KFC65505.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cyclic nucleotide-binding protein
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berkeley_reactor_200306_biofilm_scaffold_112330_5
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2392..3078)
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Putative two-component response regulator protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CUD0_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KGF66851.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
two component transcriptional regulator, winged helix family
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berkeley_reactor_200306_biofilm_scaffold_112330_6
bacterium YEK0313, Bacteria
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Not on your lists |
3184..3711
|
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CK48_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEJ16248.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
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berkeley_reactor_200306_biofilm_scaffold_112330_7
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3744..4406)
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Pyridoxal phosphate enzyme, YggS family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYZ2_9RHIZ
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EIM29184.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
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berkeley_reactor_200306_biofilm_scaffold_112330_8
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
4623..7241
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Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYZ3_9RHIZ
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berkeley_reactor_200306_biofilm_scaffold_112330_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7228..7767
|
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13E16_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE37673.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
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berkeley_reactor_200306_biofilm_scaffold_112330_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7816..8841
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holA; DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III delta subunit n=1 Tax=Rhodovulum sp. PH10 RepID=J6UFT9_9RHOB
DNA polymerase III delta subunit {ECO:0000313|EMBL:EJW12646.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
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berkeley_reactor_200306_biofilm_scaffold_112330_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(8871..9638)
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Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6L8B9_9RHOB
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
outer membrane lipoprotein carrier protein LolA
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berkeley_reactor_200306_biofilm_scaffold_112330_12
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(9786..11183)
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Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
dihydrolipoamide dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F76E18
dihydrolipoamide dehydrogenase
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berkeley_reactor_200306_biofilm_scaffold_112330_13
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11203..11655)
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UPI0003CDEBE4 related cluster n=1 Tax=unknown RepID=UPI0003CDEBE4
Uncharacterized protein {ECO:0000313|EMBL:ESX70154.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
hypothetical protein
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berkeley_reactor_200306_biofilm_scaffold_112330_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11709..12470)
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dihydrolipoamide succinyltransferase (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
2-oxoglutarate dehydrogenase E2 component n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J3H2_RHOP2
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