name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_biofilm_scaffold_21758_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..751)
|
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036867D3
Uncharacterized protein {ECO:0000313|EMBL:KFC74024.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_2
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(886..2175)
|
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
adenylosuccinate synthetase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E869C7
adenylosuccinate synthetase
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2333..3142)
|
creatininase n=1 Tax=Xanthobacteraceae RepID=UPI0003804896
creatininase
Creatininase {ECO:0000313|EMBL:ADH90124.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3217..4521)
|
Major facilitator family transporter n=2 Tax=Pseudomonas RepID=F0E7J8_PSEDT
MFS transporter {ECO:0000313|EMBL:KGM34504.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
major facilitator superfamily transporter
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_5
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4693..5457
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030D4D78
Putative permease {ECO:0000313|EMBL:KFB08822.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5489..6979)
|
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J6V1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11820.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_7
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7349..8341
|
glucosyl transferase (EC:2.4.1.-)
bactoprenol glucosyl transferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000382E6D6
Glycosyltransferase {ECO:0000313|EMBL:KGT73629.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_8
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8353..9915
|
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QX05_METTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL80002.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_9
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9917..11491
|
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000378E05B
conserved membrane hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM86199.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_10
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11533..13089
|
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000378E05B
Uncharacterized protein {ECO:0000313|EMBL:EJZ31893.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13161..14789
|
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVB9_9RHIZ
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EIM27911.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
AMP-dependent synthetase and ligase
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_12
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14814..16112)
|
Putative FHA domain containing protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7H9_ANADF
FHA domain-containing protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16297..16476)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RY25_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig159, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52366.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_14
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16799..16981
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000368E6EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK50884.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_15
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17210..18544
|
hypothetical protein n=1 Tax=Mycobacterium sp. 141 RepID=UPI00036C30C8
peptidylprolyl isomerase
Peptidylprolyl isomerase {ECO:0000313|EMBL:AGW94754.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18578..19285)
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D9AFB6
Uncharacterized protein {ECO:0000313|EMBL:EIM27359.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_17
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19490..21118)
|
UPI0003CF9C83 related cluster n=1 Tax=unknown RepID=UPI0003CF9C83
Aminopeptidase {ECO:0000313|EMBL:ESY64635.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
L-aminopeptidase/D-esterase
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_18
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21115..22584)
|
Xylulokinase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IBW2_BEII9
xylulokinase
Xylulokinase {ECO:0000313|EMBL:ACB93834.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_19
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22683..23696)
|
PfkB domain protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FWC5_ACICJ
ribokinase-like domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ABQ29907.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
|
|
berkeley_reactor_200306_biofilm_scaffold_21758_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23814..24377)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1M7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81574.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|