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berkeley_reactor_200306_planktonic_scaffold_31163

Search features with annotation key words

Displaying items 1-30 of 689 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_31163_1
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

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1..282
-----------------
DNA (282bp)
protein (94aa)
Histone H3 n=17 Tax=Metazoa RepID=I1G9C5_AMPQE
Histone H3 {ECO:0000256|RuleBase:RU004471}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
berkeley_reactor_200306_planktonic_scaffold_31163_2
Rhizopus microsporus, Rhizopus, Mucorales, Fungi

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comp(561..749)
-----------------
DNA (189bp)
protein (63aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3JEN8_STRPU
Putative SSU rRNA processing protein {ECO:0000313|EMBL:CEI96843.1}; TaxID=58291 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Mucorineae; Rhizopodaceae; Rhizopus.;" source="Rhizopus microsporus.;"
berkeley_reactor_200306_planktonic_scaffold_31163_3
unknown

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2916..3215
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_4
unknown

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4255..4692
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_5
unknown

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5006..5245
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_6
Rattus norvegicus, Rattus, Rodentia, Mammalia, Chordata, Metazoa

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5860..6111
-----------------
DNA (252bp)
protein (84aa)
Delta-aminolevulinic acid dehydratase; Short=ALADH;; EC=4.2.1.24;; Porphobilinogen synthase; TaxID=10116 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.;" source="Rattus norvegicus (Rat).;"
HemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Rattus norvegicus RepID=HEM2_RAT
berkeley_reactor_200306_planktonic_scaffold_31163_trna_8
unknown

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comp(6246..6317)
-----------------
DNA (72bp)
transferRNA Glu
berkeley_reactor_200306_planktonic_scaffold_31163_7
unknown

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7935..8204
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_8
Thalassiosira oceanica, Thalassiosira, Thalassiosirales, Coscinodiscophyceae, Bacillariophyta, Eukaryota

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8254..8532
-----------------
DNA (279bp)
protein (93aa)
Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica RepID=K0TMS7_THAOC
Uncharacterized protein {ECO:0000313|EMBL:EJK72947.1}; Flags: Fragment;; TaxID=159749 species="Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira.;" source="Thalassiosira oceanica (Marine diatom).;"
berkeley_reactor_200306_planktonic_scaffold_31163_9
unknown

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comp(8455..8889)
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_10
unknown

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comp(8861..9154)
-----------------
DNA (294bp)
protein (98aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_11
unknown

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comp(9692..9823)
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_12
Oryza brachyantha, Oryza, Poales, commelinids, Streptophyta, Viridiplantae

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10057..10569
-----------------
DNA (513bp)
protein (171aa)
Uncharacterized protein n=1 Tax=Oryza brachyantha RepID=J3MTV7_ORYBR
Uncharacterized protein {ECO:0000313|EnsemblPlants:OB08G25380.1}; TaxID=4533 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza.;" source="Oryza brachyantha.;"
berkeley_reactor_200306_planktonic_scaffold_31163_13
Daphnia pulex, Daphnia, Diplostraca, Phyllopoda, Arthropoda, Metazoa

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11289..11627
-----------------
DNA (339bp)
protein (113aa)
PREDICTED: eukaryotic translation initiation factor 1A, Y-chromosomal-like n=2 Tax=Strongylocentrotus purpuratus RepID=UPI00026527D4
Putative uncharacterized protein {ECO:0000313|EMBL:EFX73236.1}; TaxID=6669 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.;" source="Daphnia pulex (Water flea).;"
translation initiation factor 1A (aeIF-1A)
berkeley_reactor_200306_planktonic_scaffold_31163_14
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

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comp(12479..13420)
-----------------
DNA (942bp)
protein (314aa)
Mannosyltransferase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9C8W4_CAPO3
Mannosyltransferase, variant {ECO:0000313|EMBL:KJE93871.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
berkeley_reactor_200306_planktonic_scaffold_31163_15
unknown

Not on your lists

13530..13727
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_16
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

Not on your lists

comp(13965..14453)
-----------------
DNA (489bp)
protein (163aa)
Mannosyltransferase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9C8W4_CAPO3
Mannosyltransferase, variant {ECO:0000313|EMBL:KJE93871.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
berkeley_reactor_200306_planktonic_scaffold_31163_17
Chlorella variabilis, Chlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

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15827..16741
-----------------
DNA (915bp)
protein (305aa)
Putative uncharacterized protein n=1 Tax=Chlorella variabilis RepID=E1ZJY4_CHLVA
Putative uncharacterized protein {ECO:0000313|EMBL:EFN54074.1}; TaxID=554065 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella.;" source="Chlorella variabilis (Green alga).;"
berkeley_reactor_200306_planktonic_scaffold_31163_18
unknown

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16763..17662
-----------------
DNA (900bp)
protein (300aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_19
Vitis vinifera, Vitis, Vitales, rosids, Streptophyta, Viridiplantae

Not on your lists

18005..19150
-----------------
DNA (1146bp)
protein (382aa)
Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=F6HH50_VITVI
Putative uncharacterized protein {ECO:0000313|EMBL:CCB51546.1}; TaxID=29760 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Vitis.;" source="Vitis vinifera (Grape).;"
berkeley_reactor_200306_planktonic_scaffold_31163_20
Solanum tuberosum, Solanum, Solanales, asterids, Streptophyta, Viridiplantae

Not on your lists

19232..21346
-----------------
DNA (2115bp)
protein (705aa)
UPI0003D296BF related cluster n=1 Tax=unknown RepID=UPI0003D296BF
Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400036235}; TaxID=4113 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.;" source="Solanum tuberosum (Potato).;"
chaperone protein DnaJ
berkeley_reactor_200306_planktonic_scaffold_31163_21
Prunus persica, Prunus, Rosales, rosids, Streptophyta, Viridiplantae

Not on your lists

21336..22343
-----------------
DNA (1008bp)
protein (336aa)
PREDICTED: dnaJ homolog subfamily C GRV2-like isoform X2 n=1 Tax=Cicer arietinum RepID=UPI00032AB6F6
Uncharacterized protein {ECO:0000313|EMBL:EMJ04254.1}; TaxID=3760 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus.;" source="Prunus persica (Peach) (Amygdalus persica).;"
berkeley_reactor_200306_planktonic_scaffold_31163_22
unknown

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22475..22915
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_23
unknown

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comp(22984..23148)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_24
unknown

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comp(23363..23860)
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_25
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

Not on your lists

comp(25367..28222)
-----------------
DNA (2856bp)
protein (952aa)
Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9BXL4_CAPO3
Uncharacterized protein {ECO:0000313|EMBL:KJE89464.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
family 2 glycosyl transferase
berkeley_reactor_200306_planktonic_scaffold_31163_26
unknown

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comp(30112..30606)
-----------------
DNA (495bp)
protein (165aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_27
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

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comp(30922..31491)
-----------------
DNA (570bp)
protein (190aa)
Putative uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UQF6_SALR5
Putative uncharacterized protein {ECO:0000313|EMBL:EGD79861.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_31163_28
unknown

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comp(31843..32280)
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_31163_29
unknown

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comp(32482..32730)
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

Displaying items 1-30 of 689 in total

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