ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_105867_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Planctomycetes_67_37

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 263..1522

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein blaR1 n=1 Tax=Rhodopirellula baltica SH28 RepID=K5DC07_RHOBT similarity UNIREF
DB: UNIREF100
  • Identity: 32.7
  • Coverage: 441.0
  • Bit_score: 214
  • Evalue 1.80e-52
Regulatory protein blaR1 {ECO:0000313|EMBL:EKK00354.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.7
  • Coverage: 441.0
  • Bit_score: 214
  • Evalue 2.50e-52
antirepressor regulating drug resistance protein similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 432.0
  • Bit_score: 202
  • Evalue 1.50e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopirellula baltica → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1260
ATGGTCCATCAATTCTATGAACGCGAGATCCTCGGCACGTCTTCCGACGTCGTCCTGGCCCCGAGCCTGCCGATCTCGGGGACCGTGCGCGATCGTTCGACCGGGCGGCCCTTGGCTGGCGTCGAGGTCCGAACGGGCCCGACGATTCGAGTTCCCATGGTCAAGACCACGACGGACCGCGAAGGCCGCTACCGACTCACGGGCCTTCCCATCGGCCGCGAGGTCCGCCTCTCGGCCGTCGTCGAGGACGATCGGCCCTACCTGTCGGGGAGCCGATCGTTCAATCTCCGGCCCGGAGAACGGACGAAGGACATCTCCTTCGCCCTTCAACGGGGCCTCTGGATCAGCGGCCGGGTCATCGACCGCACGACGGGGCAGCCCGTCGAGGGCCAGGTGACTTACTTCGCATTCGAGGACAACACTCATGCTCGGAAGGAAGACTTCCCCGAGCACCAGATCAGGATGGTCTCAAACTCACGCGACGGGTCGTTCCGCATCGTCGGGCTACCCGGCCCTGGCATCGTCGCCTTCCGGGCCTCGCGTTGGGACTACTACGAGGGCCTCGGGGCCGACTCGATCCGCGGGGAAAGACCACACCACGCATTCATGACCTTGCCGCCATGCCACTCCGTTTTGTATCACAGCCTTGCCGAGATCAACCCGCCCGAAGGAGCCGAGGGCCAGGCTCGGGACCTCGTCGTCGATCCCGGCCGAACGGTCACGGTGAGGTTCGTCGGACCCGGCGACAAGCCTGTATCCGGGGTCGTGGTCCTCGAGCGTGGATCGAGGCTAGGGAACGGGATGCAAGCCACCAAATCCTCCGAATACGAGGTCCGGTCCCTCGCGCCCGGGGAGAAGCGGACCATGACGTTCTGGCAGAATGATCAACACCTGATCGCTCAATTCACGGCGAGCGATGATCAATCAAGCCCCATCACCCTGCGGCTCCAGCCCTGGGGTGTCGTCACCGGCCGGCTCGTAAATACGTCGGGCGAACTCGGGGGCGGCGTCTCGGTCAAAGGGATGGACAGCCCGCGCTTCCAGGGGGACATGGTGATCGGCTCGTCTGTAGGCGAGTCCTCTTTCCAGGCCGATGAGCGCGGTCGATTCCGGATTGAAGGGCTCGTCCCCGAGATCAAATACGACTTTCACGCCCTGGGGAAGTTTGGCACGCAGTCTTTCCTGGCCAAAGACCTCTCCGTCGCATCGGGCGAGACGCGCGATCTCGGCGATCTCACCTCGAAGGCCGACCCTCGCTGA
PROTEIN sequence
Length: 420
MVHQFYEREILGTSSDVVLAPSLPISGTVRDRSTGRPLAGVEVRTGPTIRVPMVKTTTDREGRYRLTGLPIGREVRLSAVVEDDRPYLSGSRSFNLRPGERTKDISFALQRGLWISGRVIDRTTGQPVEGQVTYFAFEDNTHARKEDFPEHQIRMVSNSRDGSFRIVGLPGPGIVAFRASRWDYYEGLGADSIRGERPHHAFMTLPPCHSVLYHSLAEINPPEGAEGQARDLVVDPGRTVTVRFVGPGDKPVSGVVVLERGSRLGNGMQATKSSEYEVRSLAPGEKRTMTFWQNDQHLIAQFTASDDQSSPITLRLQPWGVVTGRLVNTSGELGGGVSVKGMDSPRFQGDMVIGSSVGESSFQADERGRFRIEGLVPEIKYDFHALGKFGTQSFLAKDLSVASGETRDLGDLTSKADPR*