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berkeley_reactor_200306_planktonic_scaffold_24546

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Displaying items 31-40 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_24546_31
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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63472..64305
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000373A777
Amidohydrolase {ECO:0000313|EMBL:KKB13126.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
amidohydrolase
berkeley_reactor_200306_planktonic_scaffold_24546_32
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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64298..65038
DNA (741bp) protein (247aa)
oxidoreductase id=12554105 bin=CNBR_ACIDO species=Rudaea cellulosilytica genus=Rudaea taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
oxidoreductase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
berkeley_reactor_200306_planktonic_scaffold_24546_33
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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65071..65874
DNA (804bp) protein (268aa)
Ureidoglycolate lyase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ILZ6_9BACT
5-carboxymethyl-2-hydroxymuconate isomerase
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:AHF92761.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_24546_34
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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65975..66688
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XND4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58687.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Fe-S oxidoreductase
berkeley_reactor_200306_planktonic_scaffold_24546_35
R_RIF_OD1_11_51_15, RIF-OD1-11, Parcubacteria, Bacteria

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comp(66890..67405)
DNA (516bp) protein (172aa)
DNA repair protein RadC n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSW5_9BACT
radC; DNA repair protein RadC
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_51_15_curated
berkeley_reactor_200306_planktonic_scaffold_24546_36
R_RIF_OD1_11_51_15, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(67420..67731)
DNA (312bp) protein (104aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_51_15_curated
berkeley_reactor_200306_planktonic_scaffold_24546_37
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

68632..72279
DNA (3648bp) protein (1216aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHG8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60803.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
fibronectin type III protein
berkeley_reactor_200306_planktonic_scaffold_24546_38
unknown

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comp(72372..72548)
DNA (177bp) protein (59aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_24546_39
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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73194..79109
DNA (5916bp) protein (1972aa)
YD repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBW8_9BACT
YD repeat protein {ECO:0000313|EMBL:EDY16084.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
type IV secretion protein Rhs
berkeley_reactor_200306_planktonic_scaffold_24546_40
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

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comp(79675..79998)
DNA (324bp) protein (108aa)
Putative uncharacterized protein id=3837326 bin=GWC2_Spirochaete_52_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
transposase IS4 family protein
Tax=GWC2_Spirochaetes_52_13_curated
Displaying items 31-40 of 40 in total

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