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berkeley_reactor_200306_planktonic_scaffold_226867

Search features with annotation key words

Displaying items 91-109 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_226867_90
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

136461..138308
DNA (1848bp) protein (616aa)
S-layer domain protein id=4059418 bin=GWF2_Planctomycete_41_51 species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
S-layer protein
Tax=GWF2_Planctomycetes_41_51_curated
berkeley_reactor_200306_planktonic_scaffold_226867_91
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

138292..139554
DNA (1263bp) protein (421aa)
Cellobiose 2-epimerase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZH2_9BACL
N-acyl-D-glucosamine 2-epimerase
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
berkeley_reactor_200306_planktonic_scaffold_226867_92
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

139629..141515
DNA (1887bp) protein (629aa)
Dockerin type 1 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SMC4_CLOC7
Dockerin type 1
Dockerin type 1 {ECO:0000313|EMBL:ADL53780.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
berkeley_reactor_200306_planktonic_scaffold_226867_93
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

141512..142696
DNA (1185bp) protein (395aa)
4-O-beta-D-mannosyl-D-glucose phosphorylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z3M7_MELRP
glycosidase PH1107-related protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
berkeley_reactor_200306_planktonic_scaffold_226867_94
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(143069..145222)
DNA (2154bp) protein (718aa)
Alpha-L-arabinofuranosidase-like protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIK2_9BACT
Alpha-L-arabinofuranosidase-like protein {ECO:0000313|EMBL:EEF60265.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative alpha-L-arabinofuranosidase
berkeley_reactor_200306_planktonic_scaffold_226867_95
unknown

Not on your lists

comp(145317..147458)
DNA (2142bp) protein (714aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_226867_96
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(147685..148629)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL25_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59519.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_226867_97
unknown

Not on your lists

comp(148657..149058)
DNA (402bp) protein (134aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_226867_98
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

149223..150356
DNA (1134bp) protein (378aa)
Signal peptide and transmembrane prediction n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCK1_9BACT
Signal peptide and transmembrane prediction {ECO:0000313|EMBL:EEF62669.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_226867_99
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

150353..152167
DNA (1815bp) protein (605aa)
Glycoside hydrolase family 3 domain protein id=4220714 bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
glycoside hydrolase family protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
berkeley_reactor_200306_planktonic_scaffold_226867_100
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

152633..153307
DNA (675bp) protein (225aa)
Putative uncharacterized protein id=4343886 bin=GWF2_Planctomycetes_42_9 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
cytidyltransferase
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
berkeley_reactor_200306_planktonic_scaffold_226867_101
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

153327..154964
DNA (1638bp) protein (546aa)
Alpha-L-fucosidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKN7_NIAKG
glycoside hydrolase family 29 (alpha-L-fucosidase)
Tax=RBG_13_Planctomycetes_60_9_curated
berkeley_reactor_200306_planktonic_scaffold_226867_102
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

154968..155786
DNA (819bp) protein (273aa)
Cytidyltransferase-related protein n=1 Tax=uncultured bacterium RepID=K2CQ69_9BACT
cytidyltransferase-like protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
berkeley_reactor_200306_planktonic_scaffold_226867_103
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

155985..157088
DNA (1104bp) protein (368aa)
Putative PAS/PAC sensor protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI95_9BACT
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:EEF60356.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
response receiver sensor phosphatase
berkeley_reactor_200306_planktonic_scaffold_226867_104
unknown

Not on your lists

comp(157273..158019)
DNA (747bp) protein (249aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_226867_105
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

158625..160358
DNA (1734bp) protein (578aa)
Putative uncharacterized protein id=3838093 bin=GWF2_Lentisphaerae_50_93 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
berkeley_reactor_200306_planktonic_scaffold_226867_106
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

160478..164413
DNA (3936bp) protein (1312aa)
Fibronectin type III domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEM0_NIAKG
fibronectin type III domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:AEV99442.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
berkeley_reactor_200306_planktonic_scaffold_226867_107
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164432..165388
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00037CBA55
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGD54736.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;"
berkeley_reactor_200306_planktonic_scaffold_226867_108
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165416..165553)
DNA (138bp) protein (46aa)
IS4 family transposase n=2 Tax=Proteobacteria RepID=K6CS20_PSEST
transposase, IS4 family
Uncharacterized protein {ECO:0000313|EMBL:EPD38756.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Displaying items 91-109 of 109 in total

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