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berkeley_reactor_200306_planktonic_scaffold_30796_28

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 56408..57685

Top 3 Functional Annotations

Value Algorithm Source
endo-1,4-beta-xylanase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00035C7747 similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 423.0
  • Bit_score: 513
  • Evalue 1.50e-142
glycoside hydrolase family protein similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 434.0
  • Bit_score: 503
  • Evalue 5.50e-140
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 387.0
  • Bit_score: 550
  • Evalue 2.00e-153

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Taxonomy

RBG_19FT_COMBO_Planctomycetes_48_8_curated → Physcisphaerae → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1278
GTGAAGACCTTTTCCGGCCAAGCAGCCCTCCTTTTCTGCCTCCTTGGACTTTGGGGCACAAACGTTTCCACCGCCCGTCCCGATTCCGGGCAGCCCGCCGAGCCATCGCTCCACTACCGGAATTTATTCGCTGAATCCGGCCACTCCGAAGCCCGCGTCCGGCAGCGAGTCGCCGACGCCTTCGATCAGCTTTTTCACGGAGACGCGGAAACCCAAAGGGTGTATTTCAGCGCCGGCACCAATGCCAACGGCCCGCTGGCTTACATGCTCGATGTGGCCAATCGGGACGTGCGCTCCGAAGGCATGTCCTACGGCATGATGATTTCCGTGCAGTTGGATCATAAAGCGGAATTCGACGCGTTATGGAATTGGGCAAAAACCTTCATGTATCACGACGCCACCAATCATCCGGCCTACGGTTATTTTTCCTGGTCCCTGCAGACCAACGGCACGCCCAATGATGAAATGGCCGCGCCCGATGGCGAAGAATACTTTGTCACCGCGCTCTACTTTGCCTCCGGCCGCTGGGGCAACGGCCGGGGCATTTACAATTACCGGGCGGAAGCCGACCGTCTGCTGGGACATTTCAAGCACCGCCGGCAAATCAGTGGTGAAACGATTCGCGGCCCGCGCACCGGGCGGGCCATTTTTGATTCCACCCACAAAATGGTGCGCTTCACCGCCGACATCAAGGACGACAATTACACCGATCCCTCGTATCAATTGCCCGCGTTTTATGAATTATGGTCGCGCTGGGGACCGCCGGAAGACCGCGCCTTCTGGCGCGCGGCCGCCGCCGCCAGCCGCGATTTCTTCCAACGCGCCGCCCATCCCGTCACCGCGCTGTGCCCGGAATACGCGGCCTTTGACGGTCAGCCCTGGGCGTCACCCCGCAATCGCCGGTCCGCCGACTTTCGTTTCGATGCCTGGCGCGCGGCCATGAACTGGTCGGTGGACTGGGCCTGGTGGCACGCGGACCCGCGTGAGCAGGAATTGAGCGACCGGCTGCTGGGCTTTTTCAAATCGCAGGGCATGACGAATTATGCCAACCAATATACGCTCGCCGGCAAACCGCTTTCCACCGATCACTCACCTGGTTTGGTGGCCATGAATGCCGTGGCCGCGCTGGCGAGCCGGCAGCCGTTCGCCACAAACTTTGTCGCCGCGCTCTGGGATCAGCCCGTGCCAGAAGGAACCTATCGGTATTATGACGGCCTGCTGGATCTGCTGGGCATGCTGCATTGCAGCGGCGAATTTCGCATCTGGCCGCCGCAATGA
PROTEIN sequence
Length: 426
VKTFSGQAALLFCLLGLWGTNVSTARPDSGQPAEPSLHYRNLFAESGHSEARVRQRVADAFDQLFHGDAETQRVYFSAGTNANGPLAYMLDVANRDVRSEGMSYGMMISVQLDHKAEFDALWNWAKTFMYHDATNHPAYGYFSWSLQTNGTPNDEMAAPDGEEYFVTALYFASGRWGNGRGIYNYRAEADRLLGHFKHRRQISGETIRGPRTGRAIFDSTHKMVRFTADIKDDNYTDPSYQLPAFYELWSRWGPPEDRAFWRAAAAASRDFFQRAAHPVTALCPEYAAFDGQPWASPRNRRSADFRFDAWRAAMNWSVDWAWWHADPREQELSDRLLGFFKSQGMTNYANQYTLAGKPLSTDHSPGLVAMNAVAALASRQPFATNFVAALWDQPVPEGTYRYYDGLLDLLGMLHCSGEFRIWPPQ*