ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_30796_62

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(98914..102156)

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase family 2 TIM barrel n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWD9_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 1099.0
  • Bit_score: 1024
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 1105.0
  • Bit_score: 1038
  • Evalue 0.0
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 1061.0
  • Bit_score: 1156
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RifOxyA12_full_Lentisphaerae_48_11_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 3243
ATGCTGGGCGACAACCTTTCAACCAAAAACATGTTCATGCACAAGGCACTTCCTTTTGTTCTGCTCACGACCCTCAGCATGGGGATGAGCTCCTGGCTTCACGCGGCCACGCCGCCGGATTGGGAAAATCCCGAACTCACCGGCATCAACAACGAGCCGCTGCACGCCACAATGGTGGTTTGTCCGGACGCCAAAACCGCGCTTTCGATCGGCCCGGTTTGCAATGCCGAGCGGGTGAAATCGTCGCTCTATCGTTCGCTGGATGGCGCGTGGAAGTATCACTATTCCTCCAATCAACTGGATCGCGTGCCGGATTTCTGGCTGCCCGGTTTTGACGATTCCCGGTGGACCACCATTCCGGTTCCGGCCAACGTGGAAATGGAGGGTTACGGCATTCCGATCTATGTCAATATCCGTTACCCGTGGACGTGGCATGGCACGGAGCCGACGCCGCCGGTGGTGCCGCCGGATGATCCGAACAACACGGTGAATTCCTACCGTCACGAATTTGAATTGCCGCCGGCCTGGGACGGTCGCCGCGTGATGCTCACGTTCGACGGCGTGAATTCCTTTTTTTATCTCTGGGTCAACGGCCAGAAGGTCGGCATGGGCAAGGATTCACGCACGCCGGTGGAATTTGATCTCACGAAATATCTGAAGCCCGGCAAAAATCTGCTCGCGGTGGAAAATTTCCGCTGGTGCGACGGCTCCTATCTCGAAGACCAGGACATGTGGCGCATGAGCGGCATTTTCCGCGACGTTTATTTGTGGTCGCCGCCGGAAGTGCATATCCGCGACTTTGAGCTGAAGACGACGTTCGACGATCAATACCGGGACGCCGATCTCACCGCCCGGTTGAAGATTCACAATTACAGTGCGAACGACGCGGAAATCACCGTCGAAGGGCGGTTGATTGATCCGTCCGGCCAGACGATTCTCTCGCCGTCCATGGTCACGAATGTTCCGGCCGGAGGGGAAATCGAAGTGGCCGGCACCACTGTGGTCAAAGATCCGCTGCAATGGACCGCGGAAACCCCCAATCTTTACAAGGTGTTGCTGACGGTGAAAAACGCCGCCGGCCAGGTGCTGGAAGTCATTCCGGACAACGTTGGTTTCCGGCAGGTTCAAATCAAAGACAGCAATCTGCTGGTGAACGGACAACGGATTCTCATCAAGGGGGTGGACCGGCATGAAATTGATCCCGACCGCGGCCAGGCGATCACGGTGGCGGACATGATCAAGGACATTCAAATGATGAAGGCGCACAACATCAACGCGGTGCGCTGTTCGCATTATCCGAACCAGACCGCCTGGTATGACCTTTGCGACAAGTATGGAATCTATTTGATTGACGAGGCGGACATCGAAAGCCACGGCATGGGCTACGGCGCGCACACGTTGGCGAAGGATCCGCAATTTGCCGCCGCGCACATGAACCGCACCGTCCGCATGGTGGAACGGGACAAGAATCATCCGAGCGTCATCATCTGGTCGCTCGGCAACGAGGCCGGGTTCGGCCCGAACTTCGAGGCGACCGCCGACTGGATTCATCAGCGCGACCCCGGCCGTCCGGTGCATTATGAACGCGCCGGCAACGATCCGCACACCGACATTATCTGCCCGATGTATCCCGATCCGAGAACGCTGGCCCGATACTCCGAGAAGGAGGAGAATCGTCCGTTCATCATGTGCGAATACTCGCATGCCATGGGCAACAGCAGCGGCGACATGTGGTCGTATTGGTCGCAGATTTATTCCAAACCCTATTTGCAGGGCGGTTTCATCTGGGACTGGGTGGATCAAGGCTTGCGCCAGCCGCAGGGAAAATTACCGCTGGCCCACTTTGAGAAAGTAAAACCGGGTGAAAAAACCTTCTGGGCTTACGGCGGGGATTTTGGCGATGGCACCGCGCCCAGTGACGGCAATTTCTGCTGCAACGGCCTGGTCACACCCGACCGCGAAGCGCACCCGGGTTTGTTGCAGGTATCGCACATTTACCAATATGTTCACTGTCGTGCGATTGATCTGGCCGCCCGCAAAATCGAAATCAAAAACTGGTTTGATTTCCTGAATTTAAGGGATGTTGCCACGGCATCGTGGAAACTGACCGCTGACGGCCGCGAACTTCAATCCGGCAAACTGGACGTTCCGGACCTGGCGCCGCGCGCCACGGCGGAGGTGACTTTGCCGGTCAAGGCATTCACGCCTCGACCGGGAGTGGAGTATTTTGTGGAGGTGGATTTTTATCTGAAGCAGGACACCGGGCTGCTGCGCGCCGGACATAAGATGGCGTGGGACCAGTTTGAACTGCCCGACGCCGCGCCGGCAACCGTCCTCGATTCCCGGAATTTTCCGCCGCTGAAATGGAATGTCAACGCCAACGCCGTGCAGGTGACGGGTAAAAATTTTGAAATCACGATTGACGGGACAAACGGTCTGACATCGTGGCGTTCGCACGGAACGGAATTGATTCGCAGTCCGCTGATTCCCTCGTTCTGGCGCGCCCTCACGGACAACGACCGCGGCCGGCAGGCGGGGCAGAAGCAGGGTTACTGGGAGCACGCGAATGCCGGTTTGGTGCCGCAACAATTCGCCGCCGCCAAGCAGGAGGATCATCTGGAAGTCAGCGTCAAATGGGTGCTGCCGAAAGCGGACAACGCGGCCTGGACCACCACCTATAAAATTTATGGGAACGGCGAAGTCTTCGTGGCGGCGGATTTTCAACCGGTGAAAACGGATCGGCCGCCGATGCCGCGCATGGGCATGCAGTTGAGTCTGCCGGCGGGCTTTGATCGCGTCACCTGGCTGGGCCCCGGCCCGGAGGAGACGTATTGCGACCGCATGGATGCGCCCGTCGGCCTTTACTCCGGCACGGTGGATGATCAGTTTTATGCCGGTTATGTGAAGCCCGGCGAAACCGGCAACAAGGTGGACACCCGCTGGATTGCGCTGACCAATAAAAAGGGCGCCGGCCTGCTGGCCATCGGCGAACCGCAGTTGAGCGTGAATGCGTTGCACTACGGCACCGAAGATCTGAATGCCGGTTTGCATCCCTTCCAGTTGCCGCATCGTGATTACACCGTGTTGAACCTTGACTGGAAGCAGCAGGGCGTGGGCGGCGATAACAGTTGGGGCGCCTGGCCGCACAAGGAATATCTGATTCCGTCCCAGAGCTACCGCTACCAGTTCCGGCTGCGCCCGATTGCCGCCGGCGAAAATCCCGAAAAACTGGCGCGCGAATAG
PROTEIN sequence
Length: 1081
MLGDNLSTKNMFMHKALPFVLLTTLSMGMSSWLHAATPPDWENPELTGINNEPLHATMVVCPDAKTALSIGPVCNAERVKSSLYRSLDGAWKYHYSSNQLDRVPDFWLPGFDDSRWTTIPVPANVEMEGYGIPIYVNIRYPWTWHGTEPTPPVVPPDDPNNTVNSYRHEFELPPAWDGRRVMLTFDGVNSFFYLWVNGQKVGMGKDSRTPVEFDLTKYLKPGKNLLAVENFRWCDGSYLEDQDMWRMSGIFRDVYLWSPPEVHIRDFELKTTFDDQYRDADLTARLKIHNYSANDAEITVEGRLIDPSGQTILSPSMVTNVPAGGEIEVAGTTVVKDPLQWTAETPNLYKVLLTVKNAAGQVLEVIPDNVGFRQVQIKDSNLLVNGQRILIKGVDRHEIDPDRGQAITVADMIKDIQMMKAHNINAVRCSHYPNQTAWYDLCDKYGIYLIDEADIESHGMGYGAHTLAKDPQFAAAHMNRTVRMVERDKNHPSVIIWSLGNEAGFGPNFEATADWIHQRDPGRPVHYERAGNDPHTDIICPMYPDPRTLARYSEKEENRPFIMCEYSHAMGNSSGDMWSYWSQIYSKPYLQGGFIWDWVDQGLRQPQGKLPLAHFEKVKPGEKTFWAYGGDFGDGTAPSDGNFCCNGLVTPDREAHPGLLQVSHIYQYVHCRAIDLAARKIEIKNWFDFLNLRDVATASWKLTADGRELQSGKLDVPDLAPRATAEVTLPVKAFTPRPGVEYFVEVDFYLKQDTGLLRAGHKMAWDQFELPDAAPATVLDSRNFPPLKWNVNANAVQVTGKNFEITIDGTNGLTSWRSHGTELIRSPLIPSFWRALTDNDRGRQAGQKQGYWEHANAGLVPQQFAAAKQEDHLEVSVKWVLPKADNAAWTTTYKIYGNGEVFVAADFQPVKTDRPPMPRMGMQLSLPAGFDRVTWLGPGPEETYCDRMDAPVGLYSGTVDDQFYAGYVKPGETGNKVDTRWIALTNKKGAGLLAIGEPQLSVNALHYGTEDLNAGLHPFQLPHRDYTVLNLDWKQQGVGGDNSWGAWPHKEYLIPSQSYRYQFRLRPIAAGENPEKLARE*