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berkeley_reactor_200306_planktonic_scaffold_30796_70

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(109840..110925)

Top 3 Functional Annotations

Value Algorithm Source
mandelate racemase n=1 Tax=Serratia sp. S4 RepID=UPI0003668F4A similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 357.0
  • Bit_score: 438
  • Evalue 6.60e-120
mandelate racemase/muconate lactonizing protein similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 357.0
  • Bit_score: 438
  • Evalue 1.90e-120
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ABV43801.1}; TaxID=399741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia proteamaculans (strain 568).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 357.0
  • Bit_score: 438
  • Evalue 9.20e-120

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Taxonomy

Serratia proteamaculans → Serratia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGCCAGTCATCAAGCGCATCTCCTATTTCAAGGCGGTTTCCAACCGTTCGCAACCGATCGCGGACAGCACGCATCAGATTCCCGAGATTGCGTTCCTGGTCACGCGCATCGAACTGGACAACGGCGTGACGGGCGAGGGGTATTTGCTCGCGTTTCATTATTCGCCGGCGACGATGCTGGGCGCGTTGAAGGACGCGGCCCCGCTGGCGCTGGGCCGCGAGGTCAGCGCCACCGGCGGATTGCTGGCGGCCCATGAAAAGGAGAGCGAATACTTCGGTAACGCGGGCCCGCACCGCTGGGCCGCCGGCTCGCTCAACCTCGCCGCCTGGGACGCGTGGGCGAAGACGCTGGGCGTGCCGGTCTGGAAAATGTTCGGCACCTGGCATCAACGCGTGCCGCTTTACGGCAGCGGCGGGTGGCTGTCGTATTCCGATCAGGAATTGACGGATGAAGTCACGCGCTACGTCAAACGCGGTTTCCGCTCCGTGAAAGTGAAGGTCGGTTCGCCGGAAATCCAGCGCGACATCGAACGGCTCACCAAGGTCCGCGCCACCGTCGGCCCGCACATCCGCGTGATGATGGATGCCAACCAGGGCATGGATCTCCCGGCCGCGCTGGAACTGGCGCGCGCCGCCCAGCCGCTACGGATCACCTGGTTTGAGGAGCCGTTGAAGCGAACGGATTATGACGGCTACGCGCAGTTGCGCCGGCAGGCGGGAATGTCCATTGCCACGGGCGAGCGCGAATTCGACACGGTCACCCTGCGCGAACTCATTCGCCGCGACGCCATTGACTTGTGGCAGCCCGATCTGCTGCGGCTTGGCAGTGTCGAGGCCTGGCGCGCTTCGGCGGCCCTGGCGCAGGCGCATCATCTTCCCGTGCTGCCGCATTACTACAAGGAATACGACGTGCCGTTGCTGCTGACCGTGCCCAATGCCTGCGGCGCCGAATCCTTTGACTGGGTGGACGACCTGATCACGCATCCCATCCGCATGCGGGACGGTTTTGCGTATCCGAACGAGGGCGCGGGCTGGGGCTTTGATTTCAAGGACGAGTTCTTGCAGGAGCTGGCGGCGTTCACCTGA
PROTEIN sequence
Length: 362
MPVIKRISYFKAVSNRSQPIADSTHQIPEIAFLVTRIELDNGVTGEGYLLAFHYSPATMLGALKDAAPLALGREVSATGGLLAAHEKESEYFGNAGPHRWAAGSLNLAAWDAWAKTLGVPVWKMFGTWHQRVPLYGSGGWLSYSDQELTDEVTRYVKRGFRSVKVKVGSPEIQRDIERLTKVRATVGPHIRVMMDANQGMDLPAALELARAAQPLRITWFEEPLKRTDYDGYAQLRRQAGMSIATGEREFDTVTLRELIRRDAIDLWQPDLLRLGSVEAWRASAALAQAHHLPVLPHYYKEYDVPLLLTVPNACGAESFDWVDDLITHPIRMRDGFAYPNEGAGWGFDFKDEFLQELAAFT*