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berkeley_reactor_200306_planktonic_scaffold_23420_34

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 39196..40386

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPK5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 345.0
  • Bit_score: 356
  • Evalue 2.80e-95
Uncharacterized protein {ECO:0000313|EMBL:EEF58233.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 345.0
  • Bit_score: 356
  • Evalue 3.90e-95
signal peptide similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 99.0
  • Bit_score: 68
  • Evalue 4.30e-09

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1191
ATGTCCCGCCCTCCGGTAACGATTGAAACCCGCCGCAATCTGGTGCATGGTTGCCGGCAAATGATTGTGAAAGCGAATCGGCAAACCGGCGCAAGGCCGGTGATCTGGCTCTGCTGGCTGATCCTGGCGTGGGCGGCCGGCCGGGCTGGGGCTGCCGTGGCCACGACCGATGTCCCGGTGATCACGTCGCTTTCCGTTGCCGGCACGAATCTGGTTTTCACGGCCGATTTTCCGGCCGGCGTAACCAGCGCGGTTTTGGAAATGCGGCCCCGCTTGTCCGCCAACTGGCAGCCGGCGGCGACGCTCAACGTTCCCACGAACGGTGGCCCGGTCGAATTTTTCATTCCCAAACCCGATCTGGATTCCGCCTTTTTCCGGCTGAACGCCACCCTGCTCGCGCCCCCCAATGCCCGCTTGTCCGCCGAACTGCAATATGTGGCGGTGCCGCCGCTGGGACCGCCGATCACCCGCGCGGACCAGACGAACGAAGCCGTGTTTCATTTCACGGGAATGGTTGACGGATCGGACCGGATCCGCATCACGCACCAGGGCGCATTTTGGGAACACGTCAACTGGGGCTGGCCGGGCACCGTGACGGTGAATGATTCGCAATGGGTGCCTGCGGAAAAGAATTACCTGACCAGCACCGGCGCGGTGGCGTTTTTGCCGGCGGGTTACTCGCTTTCATCCGTGAACCTGGAAACCATCCAGGGCCGCGACGTGATCGCGCTGGAGCGGACGAACAACGCGCTGATCGTGTATTTGGATGACACGCCGGCCGGCGCGGCGCCGTATGAATTCAAGCTGCATTTTCACCCGGCGAAGCCCGCACTCGTGGCAAAGACGGAATCAGCCGCCGCCGAACTGCGCGTCCGGGCGGAAATTGACGGCAGCGATGTCCTCAAAATCACGCCGGATGGAGCCGTCTGGACGCACCACGCTTATGCGTTTCCCCGCGCCGTCCGGCTGAATGACCTGCTCTGGAACGTGCGCCAGACCAACGCGCTGGCGAATGCCGGGACCAATGTGTTCTTGCCGGCAAACCTGGATTTTTCCACGGCCAAAATCGTTCGGCGACAAGGCCGGGATTTGGCGACGATGTGGGCGGACAAGGATGCCCTTTGGATTTCCTTCGCCGACAATCCAAACGGGGCTGACCACTACGAATTGGATGTGTCATTCGGGCCGTGA
PROTEIN sequence
Length: 397
MSRPPVTIETRRNLVHGCRQMIVKANRQTGARPVIWLCWLILAWAAGRAGAAVATTDVPVITSLSVAGTNLVFTADFPAGVTSAVLEMRPRLSANWQPAATLNVPTNGGPVEFFIPKPDLDSAFFRLNATLLAPPNARLSAELQYVAVPPLGPPITRADQTNEAVFHFTGMVDGSDRIRITHQGAFWEHVNWGWPGTVTVNDSQWVPAEKNYLTSTGAVAFLPAGYSLSSVNLETIQGRDVIALERTNNALIVYLDDTPAGAAPYEFKLHFHPAKPALVAKTESAAAELRVRAEIDGSDVLKITPDGAVWTHHAYAFPRAVRLNDLLWNVRQTNALANAGTNVFLPANLDFSTAKIVRRQGRDLATMWADKDALWISFADNPNGADHYELDVSFGP*