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berkeley_reactor_200306_planktonic_scaffold_23420_40

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(44630..45616)

Top 3 Functional Annotations

Value Algorithm Source
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 314.0
  • Bit_score: 388
  • Evalue 5.80e-105
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75) similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 318.0
  • Bit_score: 241
  • Evalue 1.80e-61
tRNA dimethylallyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPW4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 314.0
  • Bit_score: 388
  • Evalue 4.20e-105

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 987
ATGGCAAACACCCCCGAAAACCAGCCTTCATCCTCCATCCTCCAGCCTCATTGCCTCTTCCTCGCCGGCCCCACCGCCGTGGGCAAATCCGCCATCGCCATGGCTTTTGCGGAGCGCATCGGCGGCGAAATCATTTCCGTGGATTCCATGCAGGTGTATCGCGGACTTGACATCGGCACCGCCAAGCCCACCACCGAGGAACGTCGCCGCGTGCCGCATCATCTGCTGGATGTCTGCGATCTGAGCCAATCCTTTGATGCCGCGCAATTCGTCCGGCTGGCGGAAAAGGCAGTGGCGGAAATTCAATCGCGCCAGCGCGCGCCCATTTTCTGCGGCGGCACCGGTTTGTATTTCAAGGCGTATTTGGAGGGACTCGGCGAAGCGCCCGCCACCGATCCGAAATTGCGCGCCGAACTCGAAGCGCTGCCGTATGAATCGCTGCTCGGCGAATTACGCGAACACGATCCGGTCGCTTACGAGAAAATGGACAAACAAAACCCGCGCCGCGTCATCCGCGCCGTGGAAGTCATCCGCTTGACGGGTAAACCGTTTTCCGCCCAGCGAGCGCAGTGGGGCGAGTGCCCCCGCGAGCCGCTGTTAGCAAGCGACGCCGGCTCGCGGGGACGCTCGCCCCACCAGCCCTCAGCATCACGTCTGATCTGTTTCACTCGTGCAGCCGCTGATTTACACGCCCGCATCAACACGCGCGTGGATGAAATGTTCGCCCGCGGACTGGTGGAAGAAACCCGTGAGTTATTGAAACACGGCCTGGCGGAAAACAAATTCGCCCTGCAAGCCATCGGCTACCGGCAGGTGGTCGAACATCTCCGAGGCGAACGCGGTTTGACGGAAACCATCGAGCTCATCAAAATCCGCACCCGTCAATTTGCCAAACGGCAACTGACGTGGTTTCGGCGGCACGGAAATTGTGAATGGGTTGAGTTGCAGTCATCCGAAACGGTGGGAAACATATTAGCCAGAATCTGA
PROTEIN sequence
Length: 329
MANTPENQPSSSILQPHCLFLAGPTAVGKSAIAMAFAERIGGEIISVDSMQVYRGLDIGTAKPTTEERRRVPHHLLDVCDLSQSFDAAQFVRLAEKAVAEIQSRQRAPIFCGGTGLYFKAYLEGLGEAPATDPKLRAELEALPYESLLGELREHDPVAYEKMDKQNPRRVIRAVEVIRLTGKPFSAQRAQWGECPREPLLASDAGSRGRSPHQPSASRLICFTRAAADLHARINTRVDEMFARGLVEETRELLKHGLAENKFALQAIGYRQVVEHLRGERGLTETIELIKIRTRQFAKRQLTWFRRHGNCEWVELQSSETVGNILARI*