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berkeley_reactor_200306_planktonic_scaffold_23420_78

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 85105..86346

Top 3 Functional Annotations

Value Algorithm Source
rRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.52) similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 405.0
  • Bit_score: 508
  • Evalue 9.80e-142
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI43_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 390.0
  • Bit_score: 530
  • Evalue 1.10e-147
Uncharacterized protein {ECO:0000313|EMBL:EEF60536.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 390.0
  • Bit_score: 530
  • Evalue 1.60e-147

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1242
ATGCCTATCACGTCAAATTCTCCGACCAACACCCGCCTACGCCTGCGCATCACCTCGGCGGCGGAAACGGCTGTGCGCTCCGGCCATCCGTGGGTCTTCTCCGACAGCGTTCAGGAAACCAACCGGCCGGGCGTGACCGGCGAACTCGCGGTCATTTACGACCGCAAAGACAAGTTTCTCGCCGTTGGCTTGTTCGACGCCGATTCGCCCATTCGCGTTCGCATTTTGCACGCCGGCAAACCGCAGACGATTGATGCGCCTTGGTGGCAGGCGCGATTGGCGCAGGCGCTGGCCATCCGCCGTGGTTTGTTTGATGACCGGACGAATGGCTATCGCCTGATTCACGGCGAAAGCGACGGCTGGCCGGGATTGGTTTTGGATCGTTACGACACCACCTTGGTGCTGAAACTTTACTCGGCGGCGTGGCTGCCGCGTTTCGATGAAATTCTCGGGCTGTTGAAAAACAATGTTCCCTGCGAACGCATCGTCTTGCGCTTGAGCCGGAATATTCAGGCGGCAGCGGAGCGCCGGGCACCGTCCCGGCAGGATGGTGAGACGATGTTTGCAAAACAGGCCGGGACGGTGCCCGGCGCGCCGGTGATTTTTTCCGAGAACGGCATCCGCTTTGAAGCCGACGTGTTGCGCGGTCAAAAAACCGGCTTCTTTCTCGATCAACGCGAGAATCGCGCCGAGGTGGAAAAACTGTCGCGCGGACGCGCGGTCCTGAACGCCTTCAGTTTCTCGGGCGGTTTCTCCGTTTACGCCGCGCGCGGTGGCGCCAAATCGGTGACGGACCTCGACATCAGCGCGCACGCCCTGGCATCGGCCAAACGGAATTTCGCGCTAAACCAAGACTTCCCCGGCGTCGTCGCGTGCCGCCACGAAACCGTGCAGGCCGATGCGTTTGACTGGATTGAAAAAAACTCCGCGCGCTTTGGGCTGATCATTCTCGATCCGCCTTCGCTGGCGAAGCGGGAAAGCGAGCGCGCGACAGCGATTCGCGCCTACGAAAAATTGAATGCGCTGGGCATTGACCGGCTGGAACGCGGCGGCATTTTGGTGGCCGGCTCGTGTTCCGCGCATGTCTCCGCCCCGGAATTTTTTGACGCCGTGCGCCGGGCGGCAATGAAATCCGGTCGGAAGTTTTCCGAACTGCAAACCCGATTGCATCCGCCGGATCACCCGGCCGGCTTCAAGGAAGCGGAATACTTGAAGGTGATCTACCTGAAGTTCACTGGGTAG
PROTEIN sequence
Length: 414
MPITSNSPTNTRLRLRITSAAETAVRSGHPWVFSDSVQETNRPGVTGELAVIYDRKDKFLAVGLFDADSPIRVRILHAGKPQTIDAPWWQARLAQALAIRRGLFDDRTNGYRLIHGESDGWPGLVLDRYDTTLVLKLYSAAWLPRFDEILGLLKNNVPCERIVLRLSRNIQAAAERRAPSRQDGETMFAKQAGTVPGAPVIFSENGIRFEADVLRGQKTGFFLDQRENRAEVEKLSRGRAVLNAFSFSGGFSVYAARGGAKSVTDLDISAHALASAKRNFALNQDFPGVVACRHETVQADAFDWIEKNSARFGLIILDPPSLAKRESERATAIRAYEKLNALGIDRLERGGILVAGSCSAHVSAPEFFDAVRRAAMKSGRKFSELQTRLHPPDHPAGFKEAEYLKVIYLKFTG*